Query= MSMg01no502_o02.b1 MSMg01no502_o02.b1 CHROMAT_FILE:
MSMg01no502_o02.b1 PHD_FILE: MSMg01no502_o02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:01 2005
(361 letters)
>mm_chr2_143802487_143803246
Length = 760
Score = 644 bits (333), Expect = 0.0
Identities = 354/361 (98%), Gaps = 1/361 (0%)
Strand = Plus / Plus
Query: 1 ctagtaaggtatgtaggtgtgtgcctgtatttccagcacttgggaggtagagaatgagtt 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagtaaggtatgttggtgtgtgcctgtatttccagcacttgggaggtagagaatgagtt 260
Query: 61 aaggcctgcctggggtacatgagaccctgtctcaaagaagaatgggagtggggagccaaa 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggcctgcctggggtacatgagatcctgtctcaaagaagaatgggagtggggagccaaa 320
Query: 121 ataaagacacttcccttttggccctatccgttaaggcccaactcctcccatggggaaaaa 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 321 ataaagacacttcccttttggccctatcccttaaggcccaactcctcccatgggg-aaaa 379
Query: 181 aaaaaccatctggctaccactgctgaaggaagccttgctaccgaatatcatcttgagtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 380 aaaaaccatctggctaccactgctgaaggaagccttgctaccgaatatcatctcgagtac 439
Query: 241 taacactatttatgggatgcttcaagatgcttccagcactgtctagaagctctcgactat 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taacactagctatgggatgcttcaagatgcttccagcactgtctagaagctctcgactat 499
Query: 301 gttcagaggctaaacagcataaataaataaataaatcttaaaataagtaaataaataaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gttcagaggctaaacagcataaataaataaataaatcttaaaataagtaaataaataaac 559
Query: 361 a 361
|
Sbjct: 560 a 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 760
Length adjustment: 9
Effective length of query: 352
Effective length of database: 751
Effective search space: 264352
Effective search space used: 264352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_o02.g1 MSMg01no502_o02.g1 CHROMAT_FILE:
MSMg01no502_o02.g1 PHD_FILE: MSMg01no502_o02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:01 2005
(550 letters)
>mm_chr2_143948531_143949480
Length = 950
Score = 986 bits (510), Expect = 0.0
Identities = 540/550 (98%)
Strand = Plus / Minus
Query: 1 tgctggaaacagagctatggaatgaagagttgggaaagtcagcccaagcagcttagtaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tgctggaaacagagctatggaatgaagagttgggaaagtcagcccaagcagcttagtaga 691
Query: 61 ctctgacacacccgccgtctcaatgtttgcttcaagggaagttgagatgagattctaagt 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ctccgacacacccgccgtctcaatgtttgcttcaagggaagttgagatgagattctaagt 631
Query: 121 aaatgcttgttaacagacaggtgaaacggtaacaggctaggtaccaccagtgcagggtgt 180
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aaatgcttgttaatagacagctgaaacggtaacaggctaggtaccaccagtgcagggtgc 571
Query: 181 gccaatttccacgtgttgaggaattcagttcttatccctttggctaatgaccatgtactt 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gccaatttccacgtgttaaggaattcagttcttatccctttggctaatgaccatgtactt 511
Query: 241 tgggttttcttttgtcatctgattccacattaagacaccatctgacattaattgttggtt 300
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tgggtctccttttgtcatctgattccacattaagacaccatctgacattaattgttggtt 451
Query: 301 tctcagatcctctgctattctggaatggctcaaaggtcactaataaagtcttttggccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tctcagatcctctgctattctggaatggctcaaaggtcactaataaagtcttttggccaa 391
Query: 361 tttattaatagtcacagctatttttacttctgcttgttgcggtgcaacactgtgtagtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tttattaatagtcacagctatttttacttctgcttgttgcggtgcaacactgtgtagtac 331
Query: 421 tggaagcatagggacactgttttcctttggtgtcttttgtaggagctgggtgggggaaag 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tggaagcatagggacgctgttttcctttggtgtcttttgtaggagctgggtgggggaaag 271
Query: 481 ggttatacaggacatcttggcatcgccaggataagtagcttcggggctgggcacaactgc 540
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 270 ggttatacaggacgtcttggcatcaccaggataagtagcttcggggctgggcacaactgc 211
Query: 541 aaattgcctc 550
||||||||||
Sbjct: 210 aaattgcctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
