Query= MSMg01no502_o16.b1 MSMg01no502_o16.b1 CHROMAT_FILE:
MSMg01no502_o16.b1 PHD_FILE: MSMg01no502_o16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:03 2005
(365 letters)
>mm_chr2_148665711_148666479
Length = 769
Score = 687 bits (355), Expect = 0.0
Identities = 364/369 (98%), Gaps = 4/369 (1%)
Strand = Plus / Minus
Query: 1 gaagccctgagctgagacaggaatcactggcagttatagtgagaactggcagtgggctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaagccctgagctgagacaggaatcactggcagttatagtgagaactggcagtgggctgg 326
Query: 61 catttgagtgagtcctacagccacccagagggatcttatggaggttcagcaaccatgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catttgagtgagtcctacagccacccagagggatcttatggaggttcagcaaccatgatc 266
Query: 121 aagagctacctaggccacagcatgctcagg----tcaatagtagtaaactgaaaggaagt 176
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 aagagctacctaggccacagcatgctcaggtcaatcaatagtagtaaactgaaaggaagt 206
Query: 177 tagggcacacatacacacatgcccacacatgtgcacacgcacacacagaatgagagagag 236
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 205 tagggcacacatacacacatgcccacacatgtgcacacacacacacagaatgagagagag 146
Query: 237 agacagagacagagacagagagacagcgagacagagagactaaaagaaagtatttttata 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 agacagagacagagacagagagacagcgagacagagagactaaaagaaagtatttttata 86
Query: 297 attaatcccatgattctcctcttcggggttctactatctcctgatctaaggctgggacaa 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 attaatcccatgattctcctcttcggggttctactatctcctgatctaaggctgggacaa 26
Query: 357 gcaaggcag 365
|||||||||
Sbjct: 25 gcaaggcag 17
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 769
Length adjustment: 9
Effective length of query: 356
Effective length of database: 760
Effective search space: 270560
Effective search space used: 270560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_o16.g1 MSMg01no502_o16.g1 CHROMAT_FILE:
MSMg01no502_o16.g1 PHD_FILE: MSMg01no502_o16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:03 2005
(427 letters)
>mm_chr2_148630228_148631054
Length = 827
Score = 795 bits (411), Expect = 0.0
Identities = 423/427 (99%)
Strand = Plus / Plus
Query: 1 aaaaagtaagtgactttaagtcccatctagggttatcaaagcttcaaggtagttgggaaa 60
|||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 aaaaagtaagtggcttcaagtcccatctaaggttatcaaagcttcaaggtagttgggaaa 260
Query: 61 tcttagggcgcccagcctaagatctccaagggttctggattgctccccgcttggagtccc 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttagggcgcccagcctaagatctccaagggttctggattgctccccgcttggagtccc 320
Query: 121 agaaggcccaccttgccatcttcagagtagaagatgcagcagcatcaaggtcactcctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaggcccaccttgccatcttcagagtagaagatgcagcagcatcaaggtcactcctaa 380
Query: 181 ccccaaaactcccatcaactctggacttttaaggcagaaaaaactattgaaatttgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccccaaaactcccatcaactctggacttttaaggcagaaaaaactattgaaatttgtttt 440
Query: 241 ctgaaagtctgtccccttggactgagactaatttgtccagctaatgaggtgaatcattca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgaaagtctgtccccttggactgagactaatttgtccagctaatgaggtgaatcattca 500
Query: 301 tgctgtgcagtcatgaaggaagtctgcgtggacaatcatcttaacttagagcacaggtac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgctgtgcagtcatgaaggaagtctgcgtggacaatcatcttaacttagagcacaggtac 560
Query: 361 tagtcatctgcagcaggcctgttccaaatacaggagattagacaatatctagaccagata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagtcatctgcagcaggcctgttccaaatacaggagattagacaatatctagaccagata 620
Query: 421 gcatccc 427
|||||||
Sbjct: 621 gcatccc 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
