Query= MSMg01no503_m02.b1 MSMg01no503_m02.b1 CHROMAT_FILE:
MSMg01no503_m02.b1 PHD_FILE: MSMg01no503_m02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:08 2005
(654 letters)
>mm_chr2_43096759_43097812
Length = 1054
Score = 1222 bits (632), Expect = 0.0
Identities = 647/652 (99%), Gaps = 1/652 (0%)
Strand = Plus / Plus
Query: 4 ggaattccctgtgttccaa-tacaattgatactcctccacttcttctcggtcccatggag 62
||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattccctgtgctcaaaatacaattgatactcctccacttcttctcggtcccatggag 262
Query: 63 ttggcagagcttgtttggattgtctccattctgggcatacagtgttcttgatgacttagg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttggcagagcttgtttggattgtctccattctgggcatacagtgttcttgatgacttagg 322
Query: 123 cctcagtttcacagctttacacagagacctcctagggcttattggcagggactccaactc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cctcagtttcacagctttacacagagacctcctagggcttattggcagggactccaactc 382
Query: 183 tggtacacattggttgacctcaaaaagtttaagagagcatggcgaaaaaattcaacatat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tggtacacattggttgacctcaaaaagtttaagagagcatggcgaaaaaattcaacatat 442
Query: 243 tcttgtatcattgatacctacatacccattatcatgtagactatgctgccaagttcaggt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcttgtatcattgatacctacatacccattatcatgtagactatgctgccaagttcaggt 502
Query: 303 gcctgctcagaggagtgcctgcccccttggattgcagttcaactctctgcacatttccct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gcctgctcagaggagtgcctgcccccttggattgcagttcaactctctgcacatttccct 562
Query: 363 tcataattatttttgaaccaggaatatctataactacattatccatttaagctctcgttt 422
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 563 tcataattatttttgaaccaggaatacctataactacattatccatttaagctctcgttt 622
Query: 423 ttgattgcatttacattacataagatttatcattctttcaatgcatgagatcttgtcctt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttgattgcatttacattacataagatttatcattctttcaatgcatgagatcttgtcctt 682
Query: 483 aatgcccctattaccatagggaatactggtgtttctcttttttgtgtgtgttaatattgt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aatgcccctattaccatagggaatactggtgtttctcttttttgtgtgtgttaatattgt 742
Query: 543 taataataattcgttcttggttgcctatatctccttatgtgacaattttggctaactcaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 743 taataataattcgttcttggttgcctatatctccttatgtgacaattttggcttactcaa 802
Query: 603 gcacattttcttgtcaaatgtcacattttcatgtcatttagctctattcttt 654
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gcacattttcttgtcaaatgtcacattttcatgtcatttagctctattcttt 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_m02.g1 MSMg01no503_m02.g1 CHROMAT_FILE:
MSMg01no503_m02.g1 PHD_FILE: MSMg01no503_m02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:08 2005
(628 letters)
>mm_chr2_43243547_43244574
Length = 1028
Score = 1197 bits (619), Expect = 0.0
Identities = 625/627 (99%)
Strand = Plus / Minus
Query: 1 agatttgcatacggtcttcttcaccttttcagaggtgtgagtacatgaatgggcttgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 agatttgcatacggtcttcttcaccttttcagaggtgtgagtacatgaatgggcttgtgt 768
Query: 61 ctacattccagttctctcttgtgaagattctaagtggaaatagctcaaaatatgatggtt 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 767 ctacattccagttctctcttgtgaagattctaagtggagatagctcaaaatatgatggtt 708
Query: 121 ggcttctgcttatatatatggagttgctacttctgttcacttgtggagggaccagcaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ggcttctgcttatatatatggagttgctacttctgttcacttgtggagggaccagcaaat 648
Query: 181 actacagaaaaccagatgagaactgatgagagcctgaagcaacactaggcaataggagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 actacagaaaaccagatgagaactgatgagagcctgaagcaacactaggcaataggagat 588
Query: 241 caagtaaaaaagatccaatcagagtgttgttttcattatcaaattaattataaaacacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 caagtaaaaaagatccaatcagagtgttgttttcattatcaaattaattataaaacacaa 528
Query: 301 agcaagtctagaatattcccaggtttcagtctgatcaatatagatttattctctttttct 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 agcaagtctagaatattcctaggtttcagtctgatcaatatagatttattctctttttct 468
Query: 361 ctgttgtcactagaggattatggtttattaagagatgccattgctgtagggtcacacata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ctgttgtcactagaggattatggtttattaagagatgccattgctgtagggtcacacata 408
Query: 421 gagatagagttgacctcattaacccaatgtacacaaagtaagatcaaaagaaattatagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gagatagagttgacctcattaacccaatgtacacaaagtaagatcaaaagaaattatagc 348
Query: 481 cacactaaagagatcagcttggtgccctagataaaatgatgcaatgaggctaaataaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 cacactaaagagatcagcttggtgccctagataaaatgatgcaatgaggctaaataaatg 288
Query: 541 taatgcattctgcctgtcctttcaaccctgtttagttcttcaatggaatatttatttgtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 taatgcattctgcctgtcctttcaaccctgtttagttcttcaatggaatatttatttgtg 228
Query: 601 agggaatgtaagcacacaccatgctgc 627
|||||||||||||||||||||||||||
Sbjct: 227 agggaatgtaagcacacaccatgctgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
