Query= MSMg01no504_b24.b1 MSMg01no504_b24.b1 CHROMAT_FILE:
MSMg01no504_b24.b1 PHD_FILE: MSMg01no504_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:37 2005
(655 letters)
>mm_chr2_78215166_78216220
Length = 1055
Score = 1199 bits (620), Expect = 0.0
Identities = 644/652 (98%), Gaps = 1/652 (0%)
Strand = Plus / Plus
Query: 4 gaattcaccttgtttcttcaattacagagatcaactcttgtcactatgggtagctgtagg 63
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 204 gaattcaccttgtttcttcaattacagagatcaactcttgtcaccatgggtagctgtagg 263
Query: 64 tcctgaaggactcaggtcatgaaagtggggcacactaaagcttccagtgaacattgcttt 123
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 264 tcctgaaggactcaggtcatgaaagtggggcacactaaagcttccaatgaacattgcttt 323
Query: 124 tatgattaaaagagtttaaggtgttaggcagctgcagttggttgttttgtctgtttgttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tatgattaaaagagtttaaggtgttaggcagctgcagttggttgttttgtctgtttgttt 383
Query: 184 gtttaatttttggatgagtggccaagcttcaccttcgtgaaagactagatacaaaaaaat 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 384 gtttaatttttggatgagtggccaagcttcaccttcgtgaaagactagatacaaaaaa-t 442
Query: 244 cctacccaaaagatgttccaccatgtgacaaggacacttgctcaactatgttcatagcag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cctacccaaaagatgttccaccatgtgacaaggacacttgctcaactatgttcatagcag 502
Query: 304 cttcattcataatacccagaaattggaaataacctagatattcctcaacccaggactgga 363
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 503 cttcattcataatacccagaaattggaaataacctagatattcctcaacctaggactgga 562
Query: 364 taaagaaaatgtggtgcattttcacagtagaatattacctattaaaaataataacatcat 423
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 563 taaagaaaatgtggtgcattttcacagtagaatagtacctattaaaaataataacatcat 622
Query: 424 gaaatttgcagacaaatggatggaattagaagagatcatcctaagtgaggtaatacagat 483
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 623 gaaatttgcagacaaatggatggcattagaagagatcatcctaagtgaggtaatacagat 682
Query: 484 ccagaaagaaaaacaagtgtgctcacttagaattggatactagccacaaagtaaagtaaa 543
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 683 ccagaaagaaaaacaagtgtgctcacttagaagtggatactagccacaaagtaaagtaaa 742
Query: 544 actaggctataatctacaaaaccaaagaagcaaagtaacaaggaaggcccaagggaagat 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 743 actaggctataatctacaaaaccaaagaagcaaagtaacaaggaaggcccaagggaggat 802
Query: 604 cctcgaatctccctgaaaaggagatataagatagaaatgagggagtggtgaa 655
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 cctcgaatctccctgaaaaggagatataagatagaaatgagggagtggtgaa 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no504_b24.g1 MSMg01no504_b24.g1 CHROMAT_FILE:
MSMg01no504_b24.g1 PHD_FILE: MSMg01no504_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:38 2005
(563 letters)
>mm_chr2_78333556_78334518
Length = 963
Score = 1065 bits (551), Expect = 0.0
Identities = 560/563 (99%)
Strand = Plus / Minus
Query: 1 tgggttagagactcctatgcctagtcagtaaggatggttaaaaaataattaattaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 tgggttagagactcctatgcctagtcagtaaggatggttaaaaaataattaattaataaa 766
Query: 61 atgagtaaaaggcaggtgcatggattcaatcactttcaatagtttatgtatctattattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 atgagtaaaaggcaggtgcatggattcaatcactttcaatagtttatgtatctattattt 706
Query: 121 tttagaatatttgttttttaaggtgtcaagggatgaaagctgcataatttcccagaaata 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 705 tttagaatatttgttttttaaggtgtcaagggatgaaagctgcatagtttcccagaaata 646
Query: 181 ttatacaatgcgagccatctttacaattcataaactctttacaatgaaactgacattttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ttatacaatgcgagccatctttacaattcataaactctttacaatgaaactgacattttt 586
Query: 241 agtaatcatcacaaaatccataatgaatatttaaatccaccattgacactctagatatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 agtaatcatcacaaaatccataatgaatatttaaatccaccattgacactctagatatag 526
Query: 301 ttctcaattatttaaaaatgattgctttgttgtcacgattaacatacctgaatatgacat 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 525 ttctcaattatttaaaaatgattgctttgttgtcatgattaacatacctgaatatgacat 466
Query: 361 agctgaaccttctattaatttgtatgttgttttgcaccttaatatttagtaagcccacta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 agctgaaccttctattaatttgtatgttgttttgcaccttaatatttagtaagcccacta 406
Query: 421 ttcaccacttccagtttttatatattcttctcaatttgtattagtaatattttcctaccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttcaccacttccagtttttatatattcttctcaatttgtattagtaatattttcctaccc 346
Query: 481 gatattaaataatgtctagcaccagtactgttttgtagttcttacagtttctaagaatac 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 aatattaaataatgtctagcaccagtactgttttgtagttcttacagtttctaagaatac 286
Query: 541 tatataagtagaatgattaatgt 563
|||||||||||||||||||||||
Sbjct: 285 tatataagtagaatgattaatgt 263
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
