TTACCTACACACCACCCACAAACACACCCCACACCAACATCCCTTGTTTT
CTCTCTCTCCGCCCTCCCGTCCCCCGCCGCTAATACAAACGCTATACTCT
CAACCAAACCAACTCACATCTCACGCCATCGCCCACCCACTACCACCAGC
AAACCCGTAGCCAAATCATCACTCCTCCCCAGCTTATGCCAACACCTATC
GGTGACGCGTGCGCCGCGCGCCGCCGCGGCGGCTTTGTCTCCCGGTCCCT
TTTTCACCATCACACGTTCTCCAATCACTACACCCCGCAAAAAACACCCC
CCTTACCCACATCGTTTCGTTTATTCACTTTTCCTCNTCAGCGCGGCGNC
CCCGNGNNGGNNNNNCCCCCCCTAAAAAAAATTTTTGGCCCGGGGCCCCG
GGCCCTTAAAATACCGGGAACCTTCCCACCTTAATTCATCGGGGAAAGGC
AAGGATATCCCCGCCGGGGGAAAATTTCCAACCAGGCCTTTCCCTGTTTT
TTCCACCAGGAAGAGAAGGTAAAGGTATTTAAGAGAATTTTCCTAAAGGT
GGGTCCCCGGATGGGAAAAGGAAAAACCAAACCCCCCTTATAAACCTAAA
AAGGCCCCCAGGGAGTGGGGTTTTAAATAAAATCCAAAAAAGCCCCCCCC
CTTAACCCAAAATTTTTAAACCGTGGCCCCCCTAAACCCCGGGGAGNTTA
GGNGAACCCGCCGANGGAAACTCCCAAAATTCCCCCGGGGCCCCCGCGGG
GGGGCCCCCTAAAGGGGGGGCCCACAAAAGAAGTTTTAAAACCCCCACCC
CCCCCCCCCCAAAAAACCCCCCAATTTCTCCCGGGGGGAAAAAAAAGGGG
GGGGGGCCCAAAAAAAGGGGCCCCCAAAGGGGGGGGGGGAAAAAAAAAAA
AAAAACCCCCCGGGGGGGGGGAGAAAAACCAC

NNNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATTCTTGTAATCTAGGT
AGTAGGACTGCAGAAGTAACCCCTGTAAGTACCTGCCTGGCATGCACAAA
GCCCTGGGGCTGGTCTACACCCCCCTACACCGGCTCCACCCCTCAGCATA
AACTAGGTGTGGTGGTACATGCCTAGAATCCCAGACGGGAAGGTGGAGGC
AGGAGGATGAGGAATTAGCCATCCCCCACTGCATCGTGAGTTTGAGGCCA
GACTGCTATGTGAGACCTTGTCTCAAAAAAACAAAATGAAACTCTTTTAT
ATCTAGTAGATGCTATATAAATAATCATAGGGAGATATTCTACGTGATTA
AAAAATAACCACATACAATATTGGTAACTACATCTATATATTAATAATAA
ATCTTATCACCAATTTCTAGGATAAGTGTTCATTATGTTCTCAAAGATCA
GCCTGGAAATAAGTTCATGTAAAAAGTAATGGATTAAAGTTTTGATATAT
ACATTTATTTATTTATTTATTTAATCACTTTACATCCCAATTGCTGCCCC
CCACCCCCGTCCCCACACACAATGTCTCCCCTATCCCCATCCCCTATTCC
TCTGAGAGGGTGGCATTCTCCCCTAGGTGTCCCCCACACTGTCACATCAA
GTCTCTACAAGGCTAGGCACATCCTCTCCCACTGAAGCTAGGCAAGGCAG
CCCAGTTAGGGG

Query= MSMg01no504_e07.g1 MSMg01no504_e07.g1 CHROMAT_FILE:
MSMg01no504_e07.g1 PHD_FILE: MSMg01no504_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:49 2005
         (574 letters)



>mm_chr2_9655696_9656669
          Length = 974

 Score =  971 bits (502), Expect = 0.0
 Identities = 558/578 (96%), Gaps = 4/578 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tattcttgtaatctaggtagtaggactgcagaagtaacccctgtaagtacctgcctggca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tattcttgtaatctaggtagtaggactgcagaagtaacccctgtaagtacctgcctggca 256

                                                                       
Query: 61  tgcacaaagccctggggctggtctacacccccctacaccggctccacccctcagcataaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tgcacaaagccctggggctggtctacacccccctacaccggctccacccctcagcataaa 316

                                                                       
Query: 121 ctaggtgtggtggtacatgcctagaatcccagacgggaaggtggaggcaggaggatgagg 180
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 317 ctaggtgtggtggtacatgcctagaatcccagacgggaagttggaggcaggaggatgagg 376

                                                                       
Query: 181 aattagccatcccccactgcatcgtgagtttgaggccagac--tgctatgtgagaccttg 238
           |||||||||||||||||||||| |||||||||||||||| |  ||||||| ||||||  |
Sbjct: 377 aattagccatcccccactgcattgtgagtttgaggccagtctgtgctatgggagacccgg 436

                                                                       
Query: 239 tctc--aaaaaaacaaaatgaaactcttttatatctagtagatgctatataaataatcat 296
           ||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tctcaaaaaaaaacaaaaagaaactcttttatatctagtagatgctatataaataatcat 496

                                                                       
Query: 297 agggagatattctacgtgattaaaaaataaccacatacaatattggtaactacatctata 356
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 agggagatattctacgcgattaaaaaataaccacatacaatattggtaactacatctata 556

                                                                       
Query: 357 tattaataataaatcttatcaccaatttctaggataagtgttcattatgttctcaaagat 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tattaataataaatcttatcaccaatttctaggataagtgttcattatgttctcaaagat 616

                                                                       
Query: 417 cagcctggaaataagttcatgtaaaaagtaatggattaaagttttgatatatacatttat 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 cagcctggaaataagttcatgtaaaaagtaatggattaaagttttgatatatacatttat 676

                                                                       
Query: 477 ttatttatttatttaatcactttacatcccaattgctgccccccacccccgtccccacac 536
           ||||||||||||||| ||||||||||| ||||||||||||||||  ||||||  ||||||
Sbjct: 677 ttatttatttatttattcactttacataccaattgctgccccccgtccccgtttccacac 736

                                                 
Query: 537 acaatgtctcccctatccccatcccctattcctctgag 574
           ||||||| |||||||||||||||||||| |||||||||
Sbjct: 737 acaatgtttcccctatccccatcccctactcctctgag 774


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space:   543696
Effective search space used:   543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)