CGCCCCAGAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGA
GGATCCGCGGAATTCTTCCCCCATCTCTTGACACCTCAGACTAGAACTCG
ATTCAGAGAAGTCAATTCATGGACTGGTTGAGGAAAGGTCAGGCTGACAA
AAGAACTTGCATGTGTTTCCTTTTCCTGGTGACCTTTTTTAACATGCAAG
TGCTAGAGTCCATTGCCAATTATTAAATCAGGGGGAGTGGAGCTAAGCTG
GTTACACGTGCTCACCTTTAAATTCTGACAGGGAACCAAGGTCAAGAATC
ATAGGTTTCAAGCACTGAGTCTCAATGAGTTTCAATGTGTCTCCCAAATA
GCTGGATCATCATCTGTTAGAAACATAGTCTCATGGGCTGGGAATGGCTC
AGCTTTTAACAGCACATACTACTCTTGAAGAGAGCTGTCCTGGCTAGGGT
TTTGGGGCTCTCTGGTTTGGGTTTTGTTTTGTTTTGTTTGGTTTTGTTTG
GTTTGGTTTGGTTTGGTTTGGTTTGGTTTCTCTTTCCTCCNCTCTTTTCT
CTTCCGCCCTCTTTCTTTTCCCTTTTCCCCTTCTTTTTTTTTTTTTTCTT
TCTCTCCCCCCTCCCCTTTTTTTCCCCCCCTTTTTCCCCTTCCCCTTTTT
TCCTGTTTCTCCCTTCCTCCTCTTTTCTTCCATTATTTTGCTCTTTCTTT
ATCCCTTTCTTCTTTTTCTTTTTCTTCCCCCCGCTTTTTCGCTTCCCTTA
CACTCCCACTGCTCTTCT

CTTTTCTCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAATCTCTCAAGAAA
GAAATCGAAGATCTCAGAAAATGGAGAGATCTCTTATACTCATGGATTGG
CAGAATTAACATAGTAAAAATGGCCATCCTACCAAAGGCAATCTCCAGAT
TTAATGCAGTCCCCATCAAAATCCCAACACATTCTTCAAAGACATGGAAA
AAGCAATTCTCAGATTCATGTGGAAAGGCAAAAAGATCAGAATACCAAAA
ATAAGTCTTAACAATAAAAGAACAGCTGGGGAAAATCACCATCTCTGACC
TCAAGCTCTACAGAACAATAGTGATTAAAAACTGCATGGTATTAGTACAG
AGACAGACAGGTTGATCAATGGAATAGAATTGAAGACCCTGAAATAAAAC
CTCACACTTAAACACACTTGATTTTTGACAAAGAAACCAAAAATACACAG
TGGAAAAAAGAAAGCATCTTCAATAAATGGTGCTGGTCTAACTTGATGTC
TATATGTAGAAAAAAGAAAATAGACCCATATTTGTCAGGTTGCACAAAGT
TCAGGTCCAAATGAATCAAGGACCTCAACATAAAACCCAGATACACTCAA
TCTAATATAAGAGAAAGTGGGAAAGAGCCTTTAACTCATTGGCAAAGTGG
GAAATTTCCTATACAGAACTCCAATGGCTCACATTCTAAG

Query= MSMg01no506_a04.b1 MSMg01no506_a04.b1 CHROMAT_FILE:
MSMg01no506_a04.b1 PHD_FILE: MSMg01no506_a04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:03 2005
         (477 letters)



>mm_chr2_94607270_94608146
          Length = 877

 Score =  750 bits (388), Expect = 0.0
 Identities = 446/468 (95%), Gaps = 5/468 (1%)
 Strand = Plus / Minus

                                                                       
Query: 10  gaattcttcccccatctcttgacacctcagactagaactcgattcagagaagtcaattca 69
           |||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 532 gaattcttcccccagctgttgacacctcagactagaactccattcagagaagtcaattca 473

                                                                       
Query: 70  tggactggttgaggaaaggtcaggctgacaaaagaacttgcatgtgtttccttttcctgg 129
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 472 tggactggttgaggaaaggtcaggctgacaaaagaacttgcatgtgtttccttttcctga 413

                                                                       
Query: 130 tgaccttttttaacatgcaagtgctagagtccattgccaattattaaatcagggggagtg 189
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 412 tgaccttttttaacatgcaagtgctagagtccattgccgattattaaatcagggggagtg 353

                                                                       
Query: 190 gagctaagctggttacacgtgctcacctttaaattctgacagggaaccaaggtcaagaat 249
            |||| |||||| |||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 352 aagctgagctgggtacacgtgctcacccttaaattctgacagggaaccaaggttaagaat 293

                                                                       
Query: 250 cataggtttcaagcactgagtctcaatgagtttcaatgtgtctcccaaatagctggatca 309
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 292 cataggtttcaagcactgagtctcaatgagtttcaatgtgtctcccaaatagctgtatca 233

                                                                       
Query: 310 tcatctgttagaaacatagtctcatgggctgggaatggctcagcttttaacagcacatac 369
           ||||||||||||||||| ||||| ||||||||||||||||     |||||||||||||||
Sbjct: 232 tcatctgttagaaacatggtctcctgggctgggaatggct-----tttaacagcacatac 178

                                                                       
Query: 370 tactcttgaagagagctgtcctggctagggttttggggctctctggtttgggttttgttt 429
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 177 tactcttgaagagagctgtcctggttagggttttggggctctctggtttgggttttgttt 118

                                                           
Query: 430 tgttttgtttggttttgtttggtttggtttggtttggtttggtttggt 477
            |||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 117 ggtttggtttggtttggtttggtttggtttggtttggtttggtttggt 70


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space:   404889
Effective search space used:   404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)