MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-506A07
Chromosome	2 (Build37)
Map Location	65,667,921 - 65,668,126
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC667291, Grb14, Cobll1, LOC383705, 9330158F14Rik, Scn3a, Scn2a1
Downstream gene	A330102K23Rik, Galnt3, LOC620893, Ttc21b, Scn1a, LOC100039486, LOC383706, Scn9a, Scn7a
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC667291 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667291
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 180 ESTs, 18 Proteins pseudo : _no_value

name	Grb14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50915 MGI:1355324
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cobll1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319876 MGI:2442894
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383705 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383705
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	9330158F14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320106 MGI:2443383
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scn3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20269 MGI:98249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scn2a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110876 MGI:98248
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 48 ESTs, 22 Proteins

name	A330102K23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77771 MGI:1925021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Galnt3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14425 MGI:894695
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620893 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620893
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein

name	Ttc21b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73668 MGI:1920918
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scn1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20265 MGI:98246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039486 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC383706 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383706
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Scn9a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20274 MGI:107636
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scn7a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20272 MGI:102965
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grb14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7710031 GeneID:50915 MGI:1355324
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth factor receptor bound protein 14 transcript_id : NM_016719.1

name	Cobll1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348163 GeneID:319876 MGI:2442894
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Cobl-like 1 transcript_id : NM_177025.4

name	9330158F14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205380 GeneID:320106 MGI:2443383
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9330158F14 gene transcript_id : NM_177074.2

name	Scn3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125630312 GeneID:20269 MGI:98249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sodium channel, voltage-gated, type III, alpha transcript_id : NM_018732.2

name	Scn2a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249801 GeneID:110876 MGI:98248
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 48 ESTs, 15 Proteins product : sodium channel, voltage-gated, type II, alpha 1, transcript variant 1 transcript_id : XM_001472855.1

name	Scn2a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249807 GeneID:110876 MGI:98248
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 48 ESTs, 12 Proteins product : sodium channel, voltage-gated, type II, alpha 1, transcript variant 4 transcript_id : XM_001472911.1

name	Scn2a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249805 GeneID:110876 MGI:98248
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 48 ESTs, 12 Proteins product : sodium channel, voltage-gated, type II, alpha 1, transcript variant 3 transcript_id : XM_001472890.1

name	Scn2a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249803 GeneID:110876 MGI:98248
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 48 ESTs, 16 Proteins product : sodium channel, voltage-gated, type II, alpha 1, transcript variant 2 transcript_id : XM_001472870.1

name	Scn2a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249809 GeneID:110876 MGI:98248
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 48 ESTs, 13 Proteins product : sodium channel, voltage-gated, type II, alpha 1, transcript variant 5 transcript_id : XM_001472929.1

name	A330102K23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802326 GeneID:77771 MGI:1925021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A330102K23 gene transcript_id : NM_153409.3

name	Galnt3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7657109 GeneID:14425 MGI:894695
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 transcript_id : NM_015736.1

name	LOC620893 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367005 GeneID:620893
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : hypothetical protein LOC620893 transcript_id : XM_885274.2

name	Ttc21b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114158710 GeneID:73668 MGI:1920918
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 21B transcript_id : NM_001047604.1

name	Scn1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125630314 GeneID:20265 MGI:98246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sodium channel, voltage-gated, type I, alpha transcript_id : NM_018733.2

name	LOC100039486 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249811 GeneID:100039486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to keratin associated protein 6-2 transcript_id : XM_001472967.1

name	Scn9a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125630308 GeneID:20274 MGI:107636
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sodium channel, voltage-gated, type IX, alpha transcript_id : NM_018852.2

name	Scn7a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33469088 GeneID:20272 MGI:102965
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sodium channel, voltage-gated, type VII, alpha transcript_id : NM_009135.1

name	Grb14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710032 CCDS:CCDS16071.1 GeneID:50915 MGI:1355324
definition	GO_function : GO:0005070 - SH3/SH2 adaptor activity [Evidence IPI] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007165 - signal transduction [Evidence TAS] codon_start : 1 product : growth factor receptor bound protein 14 protein_id : NP_057928.1

name	Cobll1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32441279 CCDS:CCDS16072.1 GeneID:319876 MGI:2442894
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : cobl-related 1 product : Cobl-like 1 protein_id : NP_795999.2

name	9330158F14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205381 GeneID:320106 MGI:2443383
definition	codon_start : 1 product : hypothetical protein LOC320106 protein_id : NP_796048.2

name	Scn3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125630313 GeneID:20269 MGI:98249
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA]; GO:0001518 - voltage-gated sodium channel complex [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA]; GO:0005248 - voltage-gated sodium channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : sodium channel, voltage-gated, type III, alpha polypeptide product : sodium channel, voltage-gated, type III, alpha protein_id : NP_061202.2

name	Scn2a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249802 GeneID:110876 MGI:98248
definition	codon_start : 1 product : sodium channel, voltage-gated, type II, alpha 1 isoform 1 protein_id : XP_001472905.1

name	Scn2a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249808 GeneID:110876 MGI:98248
definition	codon_start : 1 product : sodium channel, voltage-gated, type II, alpha 1 isoform 4 protein_id : XP_001472961.1

name	Scn2a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249806 GeneID:110876 MGI:98248
definition	codon_start : 1 product : sodium channel, voltage-gated, type II, alpha 1 isoform 3 protein_id : XP_001472940.1

name	Scn2a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249804 GeneID:110876 MGI:98248
definition	codon_start : 1 product : sodium channel, voltage-gated, type II, alpha 1 isoform 2 protein_id : XP_001472920.1

name	Scn2a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249810 GeneID:110876 MGI:98248
definition	codon_start : 1 product : sodium channel, voltage-gated, type II, alpha 1 isoform 5 protein_id : XP_001472979.1

name	A330102K23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31712028 CCDS:CCDS16074.1 GeneID:77771 MGI:1925021
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA] codon_start : 1 product : TGF-beta induced apoptosis protein 2 protein_id : NP_700458.2

name	Galnt3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657110 CCDS:CCDS16075.1 GeneID:14425 MGI:894695
definition	EC_number : 2.4.1.41 GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004653 - polypeptide N-acetylgalactosaminyltransferase activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation function : glycosyl transferase note : ppGaNTase-T3 product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 protein_id : NP_056551.1

name	LOC620893 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94367006 GeneID:620893
definition	codon_start : 1 product : similar to LOC620893 protein protein_id : XP_890367.2

name	Ttc21b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114158711 CCDS:CCDS16076.1 GeneID:73668 MGI:1920918
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : tetratricopeptide repeat-containing hedgehog modulator 1 product : tetratricopeptide repeat domain 21B protein_id : NP_001041069.1

name	Scn1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125630315 GeneID:20265 MGI:98246
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA]; GO:0001518 - voltage-gated sodium channel complex [Evidence IEA] GO_function : GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : sodium channel voltage-gated type I alpha product : sodium channel, voltage-gated, type I, alpha protein_id : NP_061203.2

name	LOC100039486 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249812 GeneID:100039486
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473017.1

name	Scn9a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125630309 GeneID:20274 MGI:107636
definition	GO_component : GO:0001518 - voltage-gated sodium channel complex [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005272 - sodium channel activity [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005248 - voltage-gated sodium channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : sodium channel 25; voltage-gated sodium channel alpha subunit Nav1.7; sodium channel, voltage-gated, type IX, alpha polypeptide product : sodium channel, voltage-gated, type IX, alpha protein_id : NP_061340.2

name	Scn7a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469089 CCDS:CCDS16081.1 GeneID:20272 MGI:102965
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : sodium channel, voltage-gated, type VI, alpha polypeptide product : sodium channel, voltage-gated, type VII, alpha polypeptide protein_id : NP_033161.1

name	LOC383705 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383705
definition	number : 1 pseudo : _no_value

name	LOC383706 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383706
definition	number : 1 pseudo : _no_value

name	LOC667291 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249800 GeneID:667291
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 180 ESTs, 18 Proteins product : similar to small GTPase RhoA pseudo : _no_value transcript_id : XR_030863.1

clone name	MSMg01-413E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411N19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-537A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545L03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-308B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271K15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-478E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464P01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-401N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345H05
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-506A07.T7 (MSMg01no506_a07.b1)	MSMg01-506A07.TJ (MSMg01no506_a07.g1)
ACC	AG580514	AG580515
length	810	929
length of high quality (start - end)	234 (82 - 315)	---
definition	CHROMAT_FILE: MSMg01no506_a07.b1 PHD_FILE: MSMg01no506_a07.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:34:03 2005	CHROMAT_FILE: MSMg01no506_a07.g1 PHD_FILE: MSMg01no506_a07.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:34:04 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NNNNTACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAGAA TGCGCGGAATTCAAACCCTGTTACCAGAATTTTGGTATTGAGAAACAAAT GCAGTTTCATTATTATTTAGTATAAAACACAGTGTAAATGGCTTATAATA TGAGCATCTTAAAGGGAAAGGAAAATAATATGTAGATAGCATAATACCTT ATCATATATATTATTAGTTCCATTATACCGTTATGTTTAATATTTATTAT TTTTAAAATGTGTGTGTGTGTGCGCGCACGCATGTGTGTGTGTGTGTATG TTTGTGTGTGTGTGNGNGNGNGTGTGTGTGTTTTTTTTNNNNNNNNNNNN GGNGGNGGNNGGNGGGGGGGGTTTTTTTCGGCGTTTTTTGTTTTGTTGTT TTGNGGTTGTTTTTGTGTGTTTTTGTTTTTGGTNCCGGGTTGTTTTTTTT GGTTTTGTTTTGTTGTGCCGTGGTGGCGGTTTTTTTTTTGTTTTTCCTTT TCCCTTTTTCCTCCCCCCCTTCCTTTTCCTCTTCTCTCTTCCCTTTTTTT CTTCCCCCCTTTCTTTCCCTTTTGTTTGCCCGTCCGTCCCCTTTTTGCTC CCTTTCTTCCGTTTGTTCCCCTTTTTTTTCTTTTTTCTCCCTCTTCTTCT CTCCTCTCCCGCCCCCCCTTTTTCTTTCCTTTTTTCCCTTTTTTTCGTTT TCGTCCGCCCTTGTTGCTTTTTTCTCTTTTTTTTTCCCTCCCCCTCTCCC CTCTTTGTTTTTCGCTCCTCTTTCTCTCTCCCTTTTTTTTCCCCTTTTTC TTTTTCTCCT	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAGTTTTTCGGAAATTACGGGGAGGGAGNCTCAATAAAAACCAAAAAAAA AATTCTTTAAAAAATTTTTTCTTAAAAACAAAAACTTTGTGTAAAAAACA TAAAAAAACCCCTTCACCTTTTTCTTTAAAATTANNNTAAAAATTTGGGT AGAGACCCNCCNNNNNTAAATGTACTGAAAAAGCAAACTTTCTATTTAGT TTTCCCCTTTGGAAAAATTAAGGNNTAAAAAANNCNNNNNNNNNNNNCNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCNAACACAATAAGNNNNN NNNNNNNTCTGGGTGGGGGGCGGGTGGGGGGGGAGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGNNNNNTTCTNNNNNNNNNNNNTNTTTTTNTTTN GGGGGGGGGNNNTCCCCNNNNNNNNNNNNNNNNNNNNNTTNNNTTNNNTT GGGTGGGGGGGGGTNTNNNTTCCCCNNNNNNNNNNNNNTNNNNNNNNNNN NNNNNNNNNTTNNNNNNNNNNNNNNNNTTNTTNNTTTTNNNNNNNNNNNN NNTTNTNNTNTTTTTGTGGGATGAGGAGGAAACCATNNNNNNNNNNNNNN TTNNNTNNNNNNNNNNTTTNTTTTTTTNNNNNNNNNNNNNNNNNNNNNNN NNNNTTTTTNNNTTNNNNNNNNTNNTTTTNNNNNTNTTTTNNTNTTTTTT NNNANNATNNNNTTNANNNNNTTNNNTTTTTTTNTNATNNTNNNNNNNNN TTNNNNNNTTTTTNNNNTTTNTTTTTTTTTTTTTTTNNNNNNTNTTTNNN NNTTATTTTTTTTGTGTGGGATGGGGTTA
quality values	Open. Hide. 0 0 0 0 3 9 9 11 18 12 12 12 16 16 25 37 37 29 29 23 20 18 24 30 30 33 33 41 33 33 44 44 30 28 21 20 20 19 25 9 9 9 9 9 9 7 8 8 8 8 8 8 9 12 23 25 25 28 28 28 31 31 33 33 33 59 27 21 7 8 8 6 6 6 8 7 10 11 11 12 14 18 23 28 34 34 50 50 50 53 59 59 57 38 38 50 50 50 50 57 53 50 50 50 53 53 50 50 50 50 53 68 68 68 68 68 68 68 68 68 68 68 57 57 57 48 47 47 39 46 46 54 54 54 57 57 57 68 68 68 68 68 68 68 68 68 68 68 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 57 59 44 43 48 43 43 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 57 57 53 53 53 50 59 59 59 59 59 59 59 59 27 27 3 0 3 0 3 0 3 0 3 23 23 23 23 11 11 9 9 9 12 12 18 14 9 9 3 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 3 3 0 3 3 0 0 3 3 0 3 9 8 7 7 8 8 8 11 15 19 19 9 9 9 7 7 6 6 6 6 8 7 13 8 8 8 8 8 8 8 6 6 6 6 6 10 10 7 3 0 3 6 10 6 6 6 8 10 13 6 6 6 6 6 6 6 11 11 8 6 6 10 8 22 18 9 9 9 3 0 3 6 6 6 8 8 6 9 9 12 13 24 27 20 17 8 8 8 8 10 10 12 9 7 11 8 6 6 6 8 6 6 6 6 6 6 8 8 7 7 9 9 7 9 9 10 15 17 22 28 28 24 17 17 12 13 12 19 17 24 18 18 13 14 16 22 11 8 8 10 10 10 8 10 11 17 13 13 14 14 15 11 14 9 8 10 8 9 9 10 10 10 10 10 8 8 8 8 11 10 9 9 10 10 7 7 8 8 11 11 11 11 19 12 12 8 8 8 8 10 10 10 10 10 10 10 8 8 8 10 10 10 8 8 8 8 12 11 10 8 6 6 6 8 8 10 9 9 9 9 10 10 10 10 10 11 10 10 10 11 9 8 8 8 8 10 10 8 6 8 8 8 8 8 10 8 8 9 11 9 10 10 13 13 9 9 10 13 19 24 22 22 9 9 12 14 14 20 21 30 22 16 14 14 12 12 15 15 14 9 9 8 8 8 8 8 9 10 10 10 10 12 12 8 8 9 16 16 14 14 15 10 17 19 24 24 24 21 21 18 15 10 15 15 18 13 14 14 13 18 11 15 19 26 25 30 15 14 8 10 8 8 8 13 23 21 8 8 8 8 8 9 12 13 13 12 8 8 8 8 8 8 8 10 12 12 9 9 9 10 10 10 10 13 14 16 16 9 11 15 9 9 10 13 9 9 10 11 11 10 8 8 8 13 14 12 8 8 8 10 13 8 8 8 15 16 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 16 19 17 20 20 35 30 30 27 21 23 12 12 12 12 10 11 15 8 8 8 10 13 11 8 8 8 8 8 8	Open. Hide. 6 8 6 6 8 8 10 20 18 21 22 19 21 16 19 10 11 11 11 15 10 3 0 3 6 7 6 7 9 6 6 6 6 7 7 10 8 8 10 10 23 10 10 9 10 9 3 0 3 7 6 6 6 6 8 7 6 6 6 6 6 9 12 9 7 7 8 8 7 9 9 9 9 9 9 10 9 3 0 3 9 9 9 10 11 11 16 15 8 8 8 8 8 8 8 10 12 17 18 10 9 6 6 6 6 6 7 7 6 6 6 6 8 6 9 9 11 12 10 10 10 10 10 12 20 15 12 9 9 9 14 14 12 8 8 7 8 8 10 10 10 8 6 8 9 9 8 6 8 8 8 8 7 8 8 11 8 11 11 11 10 9 8 8 6 8 6 6 6 6 8 8 10 10 10 10 11 11 13 15 9 9 9 3 0 0 0 3 9 12 12 10 9 9 13 11 13 9 7 9 6 6 6 6 6 6 6 3 0 3 3 0 0 0 0 0 3 9 12 11 9 9 9 6 6 6 6 7 7 10 8 8 6 6 6 8 8 8 8 7 6 7 7 8 7 13 12 13 10 11 16 12 9 10 8 17 9 8 8 8 8 8 8 19 27 18 13 13 6 6 6 6 3 0 0 3 9 11 10 8 8 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 3 6 6 6 6 7 7 7 8 7 3 0 0 0 0 0 0 0 0 0 0 0 0 3 8 8 8 8 8 8 8 8 9 7 7 7 6 8 6 6 6 6 7 9 19 10 8 8 8 8 8 10 11 13 14 26 26 30 11 13 15 15 9 9 9 12 7 7 14 25 25 19 21 21 21 19 19 19 12 12 8 8 3 0 0 0 0 0 3 9 9 3 0 0 0 0 0 0 0 0 0 0 0 0 3 0 3 23 23 15 3 0 3 7 3 0 3 8 8 8 8 11 11 9 3 0 0 0 3 7 7 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 3 3 0 0 0 3 8 6 9 9 11 10 16 21 12 15 19 13 12 9 3 0 3 0 0 0 3 7 7 7 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 3 3 0 0 3 12 21 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 3 0 0 3 0 3 7 7 8 6 6 8 6 9 9 9 10 10 9 9 9 8 8 9 8 10 8 8 8 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 3 17 3 0 3 8 8 17 7 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 7 3 0 0 0 3 3 0 0 0 0 0 0 0 0 3 0 0 3 20 29 3 0 0 0 0 0 3 0 3 7 7 3 0 0 3 0 3 14 7 7 6 3 0 0 0 3 0 0 3 3 0 0 0 0 3 3 0 3 0 0 0 0 0 3 3 0 0 0 3 7 7 9 7 7 3 0 3 0 3 3 0 0 3 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 3 7 7 7 3 0 0 0 0 3 6 3 0 3 13 9 11 8 8 8 12 9 10 9 12 8 8 3 0 0 0 0 0 0 3 0 3 18 3 0 0 0 0 0 3 6 6 9 10 21 21 17 12 13 11 11 6 8 7 7 8 6 6 6 6 8 11 9 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no506_a07.b1 MSMg01no506_a07.b1 CHROMAT_FILE:
MSMg01no506_a07.b1 PHD_FILE: MSMg01no506_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:03 2005
         (234 letters)



>mm_chr2_65667721_65668354
          Length = 634

 Score =  306 bits (158), Expect = 9e-88
 Identities = 197/216 (91%), Gaps = 10/216 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttggtattgagaaacaaatgcagtttcattattatttagtataaaacacagtgtaaatgg 60
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| 
Sbjct: 201 ttggtattgagaaacaaacgcagtttcattattatttagtataaaacacagtgtaaatga 260

                                                                       
Query: 61  cttataatatgagcatcttaaagggaaaggaaaataatatgtagatagcataatacctta 120
           |||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 261 cttataatataagcatcttaaatggaaaggaaaataatatgtagatagcatattacctta 320

                                                                       
Query: 121 tcatatatattattagttccattataccgttatgtttaatatttattatttttaaaatgt 180
           | |||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ttatatattttattagttccattatactgttatgtttaatatatattatttttaaaatgt 380

                                               
Query: 181 gtgtgtgtgtgcgcgcacgcatgtgtgtgtgtgtgt 216
           ||||||||||          ||||||||||||||||
Sbjct: 381 gtgtgtgtgt----------atgtgtgtgtgtgtgt 406


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space:   140625
Effective search space used:   140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information