Query= MSMg01no508_a20.b1 MSMg01no508_a20.b1 CHROMAT_FILE:
MSMg01no508_a20.b1 PHD_FILE: MSMg01no508_a20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:49 2005
(583 letters)
>mm_chr2_143398584_143399566
Length = 983
Score = 1104 bits (571), Expect = 0.0
Identities = 577/579 (99%)
Strand = Plus / Minus
Query: 5 gaattctggcgcgtcagtgggggtcaagaaagatgcaggtttctgggcagaacttaccct 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gaattctggcgcggcagtgggggtcaagaaagatgcaggtttctgggcagaacttaccct 698
Query: 65 ggggtctctctctagctgccgcttatggtgtaggctgcgtcttcttttggcctttgcaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 ggggtctctctctagctgccgcttatggtgtaggctgcgtcttcttttggcctttgcaag 638
Query: 125 cccattgtgataaaagtgatacaggccttctgcaaaggggagctgtggaaagccaaacac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 cccattgtgataaaagtgatacaggccttctgcaaaggggagctgtggaaagccaaacac 578
Query: 185 aggaggatggttagtttctgggttggcaccacgatagaaccacgtgagcaggaactgtat 244
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 577 aggaggatggttagtttctgggttggcaccaggatagaaccacgtgagcaggaactgtat 518
Query: 245 gaggatgcaggtcaagcctcctatcagagccctgatctctgtcctcttgctttcctcact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gaggatgcaggtcaagcctcctatcagagccctgatctctgtcctcttgctttcctcact 458
Query: 305 ttgcttatctggtatccatttcttcccatttcttccaactccctctattctttcttctag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ttgcttatctggtatccatttcttcccatttcttccaactccctctattctttcttctag 398
Query: 365 gttgtagcttttacaaacttatcttcacactcatactcatcaaattctctacatttctct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gttgtagcttttacaaacttatcttcacactcatactcatcaaattctctacatttctct 338
Query: 425 cagacaagtgtttatacactgcgtggtatccagttgccacagggatgtgctgtgacaaag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 cagacaagtgtttatacactgcgtggtatccagttgccacagggatgtgctgtgacaaag 278
Query: 485 tattctcttgtatgtagccatgtcttttatcatctaacaggatggccttacaagttgttg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tattctcttgtatgtagccatgtcttttatcatctaacaggatggccttacaagttgttg 218
Query: 545 ctcacttctagggcttccttccttccttccttccttcct 583
|||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ctcacttctagggcttccttccttccttccttccttcct 179
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no508_a20.g1 MSMg01no508_a20.g1 CHROMAT_FILE:
MSMg01no508_a20.g1 PHD_FILE: MSMg01no508_a20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:49 2005
(565 letters)
>mm_chr2_143250253_143251216
Length = 964
Score = 1062 bits (549), Expect = 0.0
Identities = 561/565 (99%), Gaps = 1/565 (0%)
Strand = Plus / Plus
Query: 1 ttaactctcaagagcaaaaccaaaataagatgcttatttcaccctgaactgtggaggtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaactctcaagagcaaaaccaaaataagatgcttatttcaccctgaactgtggaggtgc 260
Query: 61 attcagatgcagcccctggaatgggctatcagaacctgagagaaaacatggtctacgcaa 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 attcagatgcagcccctggaatgggctatcagaacctgagagaaa-catggtctacgcaa 319
Query: 121 agatgacgggatgttgttaaatgcaagcccgtaaccttctcctatggacatcaacagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agatgacgggatgttgttaaatgcaagcccgtaaccttctcctatggacatcaacagctg 379
Query: 181 gcactgtgactcaatgcctcttttacttagtcagctgaatgttgttccttcacaaaatca 240
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 380 gcactgtgactaaatgcctcttttacttagtcagctgaattttgttccttcacaaaatca 439
Query: 241 aatatttgtctctgctggtgaagcagtggagcctcaccattaattatttggagagtttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aatatttgtctctgctggtgaagcagtggagcctcaccattaattatttggagagtttaa 499
Query: 301 tgaacctaaaatcacaggtggcttgtgtttgaagagaagcagagaagcctctctggcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgaacctaaaatcacaggtggcttgtgtttgaagagaagcagagaagcctctctggcttg 559
Query: 361 gtgttacacaactctgagtcagcagaatacccctttactgggtaacaagctttgaggagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtgttacacaactctgagtcagcagaatacccctttactgggtaacaagctttgaggagg 619
Query: 421 aagaaatcatcaacacagtatcccagatggtcaccagacctcattcgccatccttcctat 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 620 aagaaatcatcaacacagtatcccagatggtcaccagacctcactcgccatccttcctat 679
Query: 481 tatgctggctgatcacaagggattcactgcaaaaccttgttcaaagtctaagaaacttcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tatgctggctgatcacaagggattcactgcaaaaccttgttcaaagtctaagaaacttcc 739
Query: 541 cccagactgaaacttggctctaatc 565
|||||||||||||||||||||||||
Sbjct: 740 cccagactgaaacttggctctaatc 764
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 964
Length adjustment: 10
Effective length of query: 555
Effective length of database: 954
Effective search space: 529470
Effective search space used: 529470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
