Query= MSMg01no508_c19.b1 MSMg01no508_c19.b1 CHROMAT_FILE:
MSMg01no508_c19.b1 PHD_FILE: MSMg01no508_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:00 2005
(209 letters)
>mm_chr2_76884180_76884788
Length = 609
Score = 381 bits (197), Expect = e-110
Identities = 203/205 (99%)
Strand = Plus / Minus
Query: 1 cttctcactaccaaggcttctaaaaagaaagatcagagaacagtccgtggtgtgtggatg 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cttctcactaccaaggcttctgaaaagaaagatcagagaacagtccgtggtgtgtggatg 346
Query: 61 taaatgtaaaatgaatggataatttaacaccttacttagactatgttacaacaagaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 taaatgtaaaatgaatggataatttaacaccttacttagactatgttacaacaagaattt 286
Query: 121 ccaggtactacactggagtaaaataaggactatgttcaataactagatagaaggcaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 285 ccaggtactacactggagtaaaataaggactatgttcaataactagacagaaggcaaatt 226
Query: 181 attgatactaactcagccaaattca 205
|||||||||||||||||||||||||
Sbjct: 225 attgatactaactcagccaaattca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 609
Length adjustment: 9
Effective length of query: 200
Effective length of database: 600
Effective search space: 120000
Effective search space used: 120000
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no508_c19.g1 MSMg01no508_c19.g1 CHROMAT_FILE:
MSMg01no508_c19.g1 PHD_FILE: MSMg01no508_c19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:00 2005
(553 letters)
>mm_chr2_76685941_76686893
Length = 953
Score = 1023 bits (529), Expect = 0.0
Identities = 549/559 (98%), Gaps = 6/559 (1%)
Strand = Plus / Plus
Query: 1 tccaccgaagagggcacaagtgttaaatagaagcatgctggaatggccacatttggagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tccaccgaagagggcacaagtgttaaatagaagcatgctggaatggccacatttggagat 254
Query: 61 gaatatatggcaactggcttctgtgaccagctaagtggttcttgttctggtgttaatgtt 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gaatatatggcaactggcttatgtgaccagctaagtggttcttgttctggtgttaatgtt 314
Query: 121 attaacatcatcacaaggcaaggatgactaaggctcaccaagttacaccacatgggtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 attaacatcatcacaaggcaaggatgactaaggctcaccaagttacaccacatgggtaaa 374
Query: 181 tggctgcattaagagctgtacctttggcaggtggagccttctcctttttaggaataggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tggctgcattaagagctgtacctttggcaggtggagccttctcctttttaggaataggca 434
Query: 241 caggaactttttcctctggcttcttgggaatctcaggcactttaaagacattgtttagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 caggaactttttcctctggcttcttgggaatctcaggcactttaaagacattgtttagag 494
Query: 301 ttaagttctgactgtgaggaacaacacccacataaagcacatctaaagttgtagcagcac 360
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 495 ttaagttctgactgtgaggaacaacacccacatcaagcacatctaacgttgtagcagcac 554
Query: 361 atggcaatacacacacacacacacacacacacaca------ggttgttgtagccagaaga 414
||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 555 atggcaatacacacacacacacacacacacacacacacacaggttgttgtagccagaaga 614
Query: 415 gaggtaagcatttgaagacagatgaagttgtctatgtgcatgtcgtgtgagtggtatata 474
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 615 gaggtaagcatttgaagacagatgaaattgtctatgtgcatgtcgtgtgagtggtatata 674
Query: 475 cctttggctggtggtgcttccttctttttgggaacaggaacaggttttttctcttctgga 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 cctttggctggtggtgcttccttctttttgggaacaggaacaggttttttctcttctgga 734
Query: 535 acaggtttcttgggtacca 553
|||||||||||||||||||
Sbjct: 735 acaggtttcttgggtacca 753
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
