GGGTGGGGCCCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTTCAGTTGAGTCTCTTCTGCACATGGATGTAAAGGCT
GTTAAAAGTGGCAGCAAGAGTTTGGATAGAGAAGATACTACTAATCACAA
AATAAATTATTTTTAGATGTATTTTTAAATTAAACATAATTACATCATAT
TATTCTTTTCTTCCCTCCAACTCTTTCTATGCACCTCCCTGATGCTCTCT
CTCAAATTTATAGTCTCAAATATATATACATACATACATGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAANATNNNNTGN
NNNNANNNNNTGTGNNNNNNNNNGTNTNNTTTTNNNNNNNGATNTNNTTG
TGTTTGGTNGAATAGGTTGATATTTTANGGGGGNTATATTTANTNAGGGN
TATGTAAATTTTTGGGGGGGTATATAGATAAAAANGAAGTTNAGATTTAT
TTGTATTTTTGATATTGATTTGTTGGGGTTAGAGTATAAATTTTATGGTT
TTTTAGGGTATATGATAAATAATGAATTATTAGATTAAGAGTGGTGTTTA
AAATATGATGTTTTTTATTGATTATTGAAAAAAAAAATTGTGTGGAGGAT
TTTTTGTAATTTGGAATATTAGTAAAAGTAGTTATTGGTTTTTAGAATAA
TGGATAATATTTTTAGTATGTATTTNATAGGAGATTAATAAATTGAGAGG
AATATANTGTAGTTATAAATTAGAAGTATGTTTGATGAGG

TTTTTTTTAACGATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACCCATTAGAGGTG
AGAAGGGAATATGAAATATTTGCACACAGTGAACCAAAATGGCAAAGGAC
AACTTTCCACGAGAATTAAAGGTTTCTTGAGCATTCATTCTGATTGTGAT
TGAGTTAAAATGAGGCACATTCTTCCATTTCTCAAGTTTGTCCCTTTATG
GTCACTGTAGTGTTGACTTACCTCACAGACATGGGTAGTAATCGACATCC
AGACAAGCTGCTGAGTATTTTTTTTTGGCTTTATTTTCTGACCAACTTAG
AAACTGCCTCCTTCCTTCATGCCCTGTCCTGCCTGATTTTTATTTATAGT
GTTTCTTATAATACAATGTTGGGGAATGGGGGGTTCTTTATTACATTTCT
CTCATAATTAACATTACATATTTATGTTTTGCCCAGTGTTGTCTATAGTG
TCTACAATAATGCCCAAATAGCTTTTCAACACAGACACTCTTAAGGAAGA
GAGAGAGAGGGAGAGAGAGAGAGAGAGACTGAGACTATTTCAAACTCTAA
ATGCTGAGAACATATATGAGTCTTCTGAAAGCTAGCCTGAAGCGCCTGGG
CATACCCTCTCTGGGCCTTGGAATCTCTGCCAGGGCCTCCCTCCCCACAA
CCTCAGTGGGACCAGCNACAGACTGGATGCCAAATCCGTCCTGCACATTC
TGGAGACTAGTCAAAGTGGTTTAATGAT

Query= MSMg01no508_f24.g1 MSMg01no508_f24.g1 CHROMAT_FILE:
MSMg01no508_f24.g1 PHD_FILE: MSMg01no508_f24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:16 2005
         (518 letters)



>mm_chr2_66453602_66454521
          Length = 920

 Score =  948 bits (490), Expect = 0.0
 Identities = 513/522 (98%), Gaps = 4/522 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacccattagaggtgagaagggaatatgaaatatttgcacacagtgaaccaaaatggcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacccattagaggtgagaagggaatatgaaatatttgcacacagtgaaccaaaatggcaa 260

                                                                       
Query: 61  aggacaactttccacgagaattaaaggtttcttgagcattcattctgattgtgattgagt 120
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 aggacaactttccacgagaattaaaggtttcttgagcattcatcctgattgtgattgagt 320

                                                                       
Query: 121 taaaatgaggcacattcttccatttctcaagtttgtccctttatggtcactgtagtgttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaatgaggcacattcttccatttctcaagtttgtccctttatggtcactgtagtgttg 380

                                                                       
Query: 181 acttacctcacagacatgggtagtaatcgacatccagacaagctgctgagta--tttttt 238
           ||||||||||||||||||||||||||||  ||||||||||||||||||||||  ||||||
Sbjct: 381 acttacctcacagacatgggtagtaatctccatccagacaagctgctgagtatttttttt 440

                                                                       
Query: 239 tttggctttattttctgaccaacttagaaactgcctccttccttcatgccctgtcctgcc 298
           |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 tttggctttattttctgatcaactcagaaactgcctccttccttcatgccctgtcctgcc 500

                                                                       
Query: 299 tgatttttatttatagtgtttcttataatacaatgttggggaatggggggttctttatta 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgatttttatttatagtgtttcttataatacaatgttggggaatggggggttctttatta 560

                                                                       
Query: 359 catttctctcataattaacattacatatttatgttttgcccagtgttgtctatagtgtct 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catttctctcataattaacattacatatttatgttttgcccagtgttgtctatagtgtct 620

                                                                       
Query: 419 acaataatgcccaaatagcttttcaacacagacactcttaaggaagagagagagagggag 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaataatgcccaaatagcttttcaacacagacactcttaaggaagagagagagagggag 680

                                                     
Query: 479 agagagagagagaga--ctgagactatttcaaactctaaatg 518
           |||||||||||||||  |||||||||||||||||||||||||
Sbjct: 681 agagagagagagagagactgagactatttcaaactctaaatg 722


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 920
Length adjustment: 10
Effective length of query: 508
Effective length of database: 910
Effective search space:   462280
Effective search space used:   462280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)