TTTTACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAGAGTCTTCCGAATAATTTCACCATTGAGTTAAGTAATTT
AATAAGTGTGGGTTTTCTTCTGGCAAATCCCAAATAATGATGTCAAATTG
AGAAGAAGGCATTGTTATTAGCTAGAGTGTAAAAATGTTGCTGTGGTGGC
CAGTATGGCTTTTTTAAGGCGATTTCACCACTTCACAGCTCAGTTACTCC
CTTCATAAAGCAAGTTGCTGCCAAGTTTCTGATACGATGATACCTGGCTG
GGACTACTTTTCAGAGTTTCTAGTGACTAGTATAATCTAGCCTCTGAGTA
GAATTTCCCTCTTACTCCACAGACAGTATGTGCTGTGTATTTGTTGGCAT
CAAAAACCAAAGTTCTCAGAAATGTAGACCAAACTGGAATGTTTTGGGAG
ATAATACCTTGGAACATGTAAGAGATGTTACCAGTATTTGCCCTCTGTAA
TGAAGCCATGGCAATACAATACATAAATCCATGTATAGCTAACATGTTAG
AATGTATCATAAGCAAAGTATCGTGGGTAAAGGATGGAAGGTTGATGAGT
ATGGAGAATGAAGGATCTATTATTTCCTTACCTCAAGAGCTTTGGAGAAC
TGTCAGGTTCTCTGGGTCAGTCTGAGAAACACCAACATAATAATTTCCAA
TCAGCTTGAGTTATAATTTTCTGTAAAAATAGTTTTTAGAAATTATTTTT
TAATAACTT

NGGGTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTTTTCGCGAAATTCTGTAGTGGAAATAGATCCACCTC
AGCCAACAGGACACCACTGCAGGTGGATTGAAGAGCTGTAAGTAGTGGCT
ACTTCTCACGCTCATAAGAGCCTGCTAGAGTGCTACAGTGGCTATGGGGG
TTGGGTTAGGGGTTTTTAAGAATGGGAAGGCTGGGTCTAGCAAACAGAGT
CAGGTTCCAGACACTGGGGATTAGATTAGGAACACTTGCTGAGAAAGGCA
GGCAGTAGTGAGAGGGGAAGACATTTTTGAGCTGACTGGATTATTGATCC
ATCCCACAGAAGCCCTCTGATGGGAGAGAGAGAGAGACGAAGCTCCTGCT
AGAAAGCAAAGAGAAGACACATCAGGGATGTCAGCCCTGGACTCTTCTTC
TGGAGAAGGCAGTGGTGAGGTGACAACAGAACTTGGGGACTTGGGAAAGA
AAGGCCTGAGGCCTTCTGGCCCTGTTGACTCGCTTTCTGCAGTTCCTTCC
TTCCTGGATGACCGCTCCTCACTCTCCTTTGCCTCATGACTTATTTTCTA
CACATTTCTAGGACATGGCTCTGGCTTTCTTCTCTATTCCACATTTATTT
CCGTTATTAGCTTTAGCCCCTAATGGCTGTTTTACTGCTGGTAACTTGCA
CGTATTTCCTGCCACAAAGGGCCCCTGTGGAATTTCCCCATACTCGAAGC
CCATCCACG

Query= MSMg01no508_i03.b1 MSMg01no508_i03.b1 CHROMAT_FILE:
MSMg01no508_i03.b1 PHD_FILE: MSMg01no508_i03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:26 2005
         (676 letters)



>mm_chr2_145314743_145315818
          Length = 1076

 Score = 1207 bits (624), Expect = 0.0
 Identities = 660/672 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagagtcttccgaataatttcaccattgagttaagtaatttaataagtgtgggtt 64
           ||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagagtcagctgaataatttcaccattgagttaagtaatttaataagtgtgggtt 264

                                                                       
Query: 65  ttcttctggcaaatcccaaataatgatgtcaaattgagaagaaggcattgttattagcta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcttctggcaaatcccaaataatgatgtcaaattgagaagaaggcattgttattagcta 324

                                                                       
Query: 125 gagtgtaaaaatgttgctgtggtggccagtatggcttttttaaggcgatttcaccacttc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagtgtaaaaatgttgctgtggtggccagtatggcttttttaaggcgatttcaccacttc 384

                                                                       
Query: 185 acagctcagttactcccttcataaagcaagttgctgccaagtttctgatacgatgatacc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acagctcagttactcccttcataaagcaagttgctgccaagtttctgatacgatgatacc 444

                                                                       
Query: 245 tggctgggactacttttcagagtttctagtgactagtataatctagcctctgagtagaat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tggctgggactacttttcagagtttctagtgactagtataatctagcctctgagtagaat 504

                                                                       
Query: 305 ttccctcttactccacagacagtatgtgctgtgtatttgttggcatcaaaaaccaaagtt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttccctcttactccacagacagtatgtgctgtgtatttgttggcatcaaaaaccaaagtt 564

                                                                       
Query: 365 ctcagaaatgtagaccaaactggaatgttttgggagataataccttggaacatgtaagag 424
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 565 ctcagaaatgtagaccaaactggaatgttttgggatataataccttggaacatgtaagag 624

                                                                       
Query: 425 atgttaccagtatttgccctctgtaatgaagccatggcaatacaatacataaatccatgt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atgttaccagtatttgccctctgtaatgaagccatggcaatacaatacataaatccatgt 684

                                                                       
Query: 485 atagctaacatgttagaatgtatcataagcaaagtatcgtgggtaaaggatggaaggttg 544
           ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 685 atagctaacgtgttagaatgtatcataagcaaagtatcatgggtaaaggatggaaggttg 744

                                                                       
Query: 545 atgagtatggagaatgaaggatctattatttccttacctcaagagctttggagaactgtc 604
           |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 745 atgagtatggagaatgcaggatctattattaccttacctcaagagctttggagaaatgtc 804

                                                                       
Query: 605 aggttctctgggtcagtctgagaaacaccaacataataatttccaatcagcttgagttat 664
           |||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aggttctctatgtcagtttgagaaacaccaacataataatttccaatcagcttgagttat 864

                       
Query: 665 aattttctgtaa 676
           ||||||||||||
Sbjct: 865 aattttctgtaa 876


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space:   709956
Effective search space used:   709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)