Query= MSMg01no508_p20.b1 MSMg01no508_p20.b1 CHROMAT_FILE:
MSMg01no508_p20.b1 PHD_FILE: MSMg01no508_p20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:05 2005
(564 letters)
>mm_chr2_146676907_146677870
Length = 964
Score = 1056 bits (546), Expect = 0.0
Identities = 560/566 (98%), Gaps = 4/566 (0%)
Strand = Plus / Minus
Query: 1 catgtttga--ttccctggtttcaattctggcaacattagtaagtaaataaatgaaaatg 58
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 catgtttgaagt--cctggtttcaattctggcaacattagtaagtaaataaatgaaaatg 719
Query: 59 tcaataaataaatgttcttgttttgtttcaaatcagaaaaacctacaactactaaaagag 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tcaataaataaatgttcttgttttgtttcaaatcagaaaaacctacaactactaaaagag 659
Query: 119 tgtctaggatacttgagctaccagaaagccaaataagagccaaaatacactacaagggta 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tgtctaggatacttgagctaccagaaagccaaataagagccaaaatacactacaagggta 599
Query: 179 gtagcagaagaatgaactgttagaggcattccttaatgagacggactcactgtgtctcaa 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 598 gtagcagaagaatgaactgttagaggcattccttaatgagacggactcactgtgtctcga 539
Query: 239 catccttgtccacctacaactaagtctttgaatcatcgcccctgagttcttcaggactgt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 catccttgtccacctacaactaagtctttgaatcatcgcccctgagttcttcaggactgt 479
Query: 299 gcctctgtaggagccctctgacaggctagccctaaagcaacaaatccttgtacactttgc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gcctctgtaggagccctctgacaggctagccctaaagcaacaaatccttgtacactttgc 419
Query: 359 tctctgaggagctggaccatggctctgtgcaccggcagggacaggtctgcagccctgagt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tctctgaggagctggaccatggctctgtgcaccggcagggacaggtctgcagccctgagt 359
Query: 419 gtgtgaggggcagattatagatggtgacaacccatgtgaattgatcttacaatgccaaga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gtgtgaggggcagattatagatggtgacaacccatgtgaattgatcttacaatgccaaga 299
Query: 479 ttctcctcaaaaatcatttggtggatttcataattgtttgccacttgcatgcacttctca 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ttctcctcaaaaatcatttggtggatttcataattgtttgccacttgcatgcacttctca 239
Query: 539 tcaggggtcaacaagtactcctaact 564
|||||| |||||||||||||||||||
Sbjct: 238 tcagggttcaacaagtactcctaact 213
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no508_p20.g1 MSMg01no508_p20.g1 CHROMAT_FILE:
MSMg01no508_p20.g1 PHD_FILE: MSMg01no508_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:05 2005
(246 letters)
>mm_chr2_146546999_146547644
Length = 646
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%)
Strand = Plus / Plus
Query: 1 gagaaatgggctaaaagaaaccggagtatcaggggggaggggaaggaggcgggttcgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagaaatgggctaaaagaaaccggagtatcaggggggaggggaaggaggcgggttcgaaa 260
Query: 61 gaagaactccacagcctttcttcagatgggtttaattttgtcacttgagtcaaaattgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagaactccacagcctttcttcagatgggtttaattttgtcacttgagtcaaaattgga 320
Query: 121 aacccgttttctagtacaattgcttctgtgtttagtgagtgttgcagactctttattact 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacccgttttctagtacaattgcttctgtgtttagtgagtgttgcagactctttattaca 380
Query: 181 tgggaattttataaacttggcacctcatcatcaagccatcttgggggtcaacttcccact 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggggaattttataaacttggcacctcatcatcaagccatcttgggggtcaacttcccact 440
Query: 241 tgtact 246
||||||
Sbjct: 441 tgtact 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
