TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTATTTACATCTGTACCCCATTTTTTAAATTAAAATTAGCATAT
AGCCATAAACATTTTATAATCTTTTAAACTATACTACAGATTTTTGATCC
AACCTTCTAAAAGCATTTAAGCCTTTCCTGTGTAGTTGGATGGTATCCAA
ACTCATAGCTTTTGGGGGCTGTTACCAATACACAACCTTATTGAGAGTAC
ATTGTTTAAAGCTTATTGACTTATTGAGCATTTGGGCTAGTTTATTTTTT
TAAAATTAGATATTTTCTTCATTTACATTTCAAATGCTATCCCGAAAGTC
CCCTATGCCCTCCCTCTGCCCTGTTCCCCAACCCACCCACTCCTGCTGCC
TGGCCCTGGCATTCACCTGTATTGGGGCATATGATCTTCTACCCCATTTT
TAATACAGTTATTTGACTGTCTCAAGTCTATCTTCATGAGTTCTTTATAT
ATATTGGATATTAGTCCTCTATTAGATGTAGGGTGGTAAAGATCTTTCCC
CAATCTGTTTTGTCCTATTTACAGTGTTCTTTGCCTTACAGAAGTTTTGC
AATCTTATGGGGTCCCATTTGTTTATTTTTGATCTAAGAGCATAAACCAT
TGGTGTTCTATTCAGGAAATTTTCTCATGTGCCCATGTGTTTGATGCTCT
TCTCCACTCTTTCTTCTATTAGATTCACTATATCTGGTTTCATGTAGAGG
TCCTTGATCCACT

ACAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCCCTACACTGGGGCATCTATTGAGC
CTTCATAGGACCTCTCCTTCCATTGATGCATGACAAGGCCATCCTCTGCT
ACATATGCAGCTGGAGCCATGTGTGCTCCTTTGTTGATGGCTTAGTCCCT
GAGAGTTCTGGGGGATTCTAGTTGGTTGATATTATTTTTCTTCCTATGGG
GTTGCAAACCCTTTCAACTCCTTCAGTCCCTTCTCTAACTCTTCTATTAG
GAACCCCATGCTCAGTTTAATGGTTGACCGTTTATATCCATCACTATATT
TGTAAGGCTCTGGCACAGCCTTTCAGGAGACAGCCATATCAAGCTCCTTT
CAGCCTGCACTTCTTGGCATCCACAATAGTGTCTGGGTTTGGTTACTGTA
TATGGGATGAATCCCCAGGTGGGACAGTCTCTGGGTAGCCTTTCTTTTAG
TCTCTGCTCTACATTTATCTCCAAATTTGCTCCTGTGAGTATGTTGTTCC
CCTTCTAAGAAATACTAAAGCATGCACACTTTGGTCATGCTTCCTATTGA
GCTTCATGTGGTCTGTGAGTAGTATCCAGGTTATTTGGAGCATTTGGGCT
AGTATCCACTATCAGTGAGTGTATACCATGTATTTTCTTTGATGGNTGGG
TTACTTCACTCATGATGATATTTTCTAGCTCTATTCATTTGCATAAGGAT
TTTATGAATTAATCACTTTTTATAGCTG

Query= MSMg01no509_f17.b1 MSMg01no509_f17.b1 CHROMAT_FILE:
MSMg01no509_f17.b1 PHD_FILE: MSMg01no509_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:34 2005
         (638 letters)



>mm_chr2_97811399_97812437
          Length = 1039

 Score =  949 bits (491), Expect = 0.0
 Identities = 607/661 (91%), Gaps = 32/661 (4%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctttatttacatctgtaccccattttttaaattaaaatt---agcat---atag 57
           ||||||||||||||| ||||||||||||   ||||||  ||||||   | |||   ||||
Sbjct: 204 ggaattctttatttagatctgtacccca---tttaaa--aaaatttaaaacatcacatag 258

                                                                       
Query: 58  ccataaacattttataatcttttaaactatactacagatttttgatccaaccttctaaaa 117
           |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |
Sbjct: 259 ccataaacattttataattttttaaactatactacagatttttgatccaaccttctagca 318

                                                                       
Query: 118 gcatttaagcc-tttcctgtgtagttggatggtatccaaactcatagcttttgggggctg 176
           ||||||||||| |||||||||||||||| |||||||||||||||||||||   |||| ||
Sbjct: 319 gcatttaagccttttcctgtgtagttggttggtatccaaactcatagcttacaggggttg 378

                                                                       
Query: 177 ttaccaatacacaaccttattgagagtacattgtttaaagcttattgacttattgagcat 236
           ||||||||| |||||||||| ||| |||||||||||||||  ||||| ||||||||||||
Sbjct: 379 ttaccaataaacaaccttatggagggtacattgtttaaag-atattgtcttattgagcat 437

                                                                       
Query: 237 ttgggctagtttattttttt--------aaaattagatattttcttcatttacatttcaa 288
           ||||||||||||||||||||        ||||||||||||||||||||||||||||||||
Sbjct: 438 ttgggctagtttatttttttcttttttaaaaattagatattttcttcatttacatttcaa 497

                                                                       
Query: 289 atgctatcccgaaagtcccctatgccctccctctgccctgttccccaacccacccactcc 348
           ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 498 atgctatcccgaaagtcccctatgccctccccctgccctgtttcccaacccacccactcc 557

                                                                       
Query: 349 tgctgcctggccctggcattcacctgtattggggcatatgatcttctaccccatttttaa 408
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 558 tgctgcctggccctggcattcacctttattggggcatatgatcttctaccccatttttaa 617

                                                                       
Query: 409 tacagttatttgactgtctcaagtctatcttcatgagttctttatatatattggatatta 468
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 618 tacagttatttgactgtctcaagtctatcttcatgaattctttatatatattggatatta 677

                                                                       
Query: 469 gtcctctattagatgtagggt-ggtaaagatctttccccaatctgtt----------ttg 517
           |||||||||| |||||||| | |||||||||||||||||||||||||          |||
Sbjct: 678 gtcctctattggatgtaggattggtaaagatctttccccaatctgttggttgctgttttg 737

                                                                       
Query: 518 tcctatttacagtgttctttgccttacagaagttttgcaatcttatggggtcccatttgt 577
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tcctatttacagtgttctttgccttacagaagttttgcaatcttatggggtcccatttgt 797

                                                                       
Query: 578 ttatttttgatctaagagcataaaccattggtgttctattcaggaaattttctcatgtgc 637
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 798 ttatttttgatctaagagcataaaccattggtgttctgttcaggaaattttctcatgtgc 857

            
Query: 638 c 638
           |
Sbjct: 858 c 858


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1039
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1029
Effective search space:   646212
Effective search space used:   646212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)