TTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAAGATCGCGCGG
AATCACCTGGTCTTGCCCTTATTAATTGTTTAAATGTCTTTCAGCTGAAA
GCTTTTTTACTCTTATTTCTATCTCCTAAGTTGTTATGGGTATGGGTTTG
TTGTTGACTTAGTTCTTGGCTTGGTTTTGGTTAAATCTGGACAATTACCC
ATTTTTTAATGTTTTGCAATTTAATAGACTACAGATTTTTAAAATTATTA
CCTAACAATACTCTGAATTTCTTTGGTGTATGTGATAATGCTTCACTGCT
CATTTCTGATTTTCTTAATTTGTATTCCCTCTTTTTCTTATAGTTAGTAG
GGACAATAATCTGTTGATCTTGTTTAATTATTTTTTGGAATAACAGCTCA
TATTTTTTGACTCTTTGCATTGTTTTCTTTGTTTCTATTTCATTATTTTC
TGCTCTAATTTTTATTATTCTTACTATTGACTGGTTTGGGATTTGGTTTG
TTATTGGTTTTGTGTTTGTTTTGTTTTATGTTTCTAAAGTTTTGAGTTTC
ATCCTTGATTTATGCTTTGTCTGATTTATTTTTAAATGAGATAATTAGAG
CTATAAAGTACCCTCAGAGGGCTGCTTTCATTGTGTACCAGAGGTTTTGT
TGTTTTTTCTTTTTTAATTTAATTTAATGTTTTCTTTTACTTATTCACTC
TATATCCCACTCACTACCCCCCTCCAGGTCGCCGCCTACTACCATCCTTC
CCAT

CATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXTCCCGAAATACGGAGAATACGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGACTAATGATTATATTATAAACAAAATTCCAGAAAATAATGAATAACT
ACAAATAGATAAGCAGTTTAAATAGTATAGTTCAGCTTAAATATTATTGT
TTATAGTTTCAATTAAAATCATTGAAACATAAAATATTGGCAGTTTGACT
CAATCCAGCATAACTATATTGTTAGTTCTCAAGTTTTAATTATTTTATCT
TGAGAACCATTTTTTTTCTTAATCGGAGATTATTACTACTTTTTGGTATT
GAGGATATTGGTTGGAAATTATTTATGTTAAAAAACACTCAACTAAAGAA
AATTTGGAAGATTTTGGCTTTTTCTCCTCAAACGTGTCTAAATAATAAAT
TCCAGGATAGATTCTAAATTTCAAAGAAAATTAATTTGAACACAGAGATA
AAAATAGTAGGGGTAGAAATGAATACGAGGTGCTACTACTTCCTCAAGTA
ATAGACAATAAGATCTTGAAAAACTCTTTAGGTTACTACAAGTGAAGACA
AATAGTGAGCCTATTTATCCATGTTCTATGTGACATATATTTCAGTGTAC
ACTTTANATGGCAAAATAGTATACTAACTATACTATTCTTTTTTTTTTTT
TTTTTN

Query= MSMg01no510_g20.g1 MSMg01no510_g20.g1 CHROMAT_FILE:
MSMg01no510_g20.g1 PHD_FILE: MSMg01no510_g20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:01 2005
         (429 letters)



>mm_chr2_55166686_55167515
          Length = 830

 Score =  752 bits (389), Expect = 0.0
 Identities = 409/416 (98%), Gaps = 1/416 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctcaagttttaattattttatcttgagaacca-ttttttttcttaatcggagattattac 59
           ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 616 ctcaagttttaattattttatcttgagaatcatttttttttcttaatcggagattattac 557

                                                                       
Query: 60  tactttttggtattgaggatattggttggaaattatttatgttaaaaaacactcaactaa 119
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tactttttggtattaaggatattggttggaaattatttatgttaaaaaacactcaactaa 497

                                                                       
Query: 120 agaaaatttggaagattttggctttttctcctcaaacgtgtctaaataataaattccagg 179
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 496 agaaaatttggaagattttggctttttctcctcaaacatgtctaaataataaattccagg 437

                                                                       
Query: 180 atagattctaaatttcaaagaaaattaatttgaacacagagataaaaatagtaggggtag 239
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 436 atagattctaaatttcaaagaaaattaatttgaacacagagataaaaatggtaggggtag 377

                                                                       
Query: 240 aaatgaatacgaggtgctactacttcctcaagtaatagacaataagatcttgaaaaactc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aaatgaatacgaggtgctactacttcctcaagtaatagacaataagatcttgaaaaactc 317

                                                                       
Query: 300 tttaggttactacaagtgaagacaaatagtgagcctatttatccatgttctatgtgacat 359
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 316 tttaggttactacaagtgaagacaaatagtgaacctatttatccatgttctatgtgacat 257

                                                                   
Query: 360 atatttcagtgtacactttanatggcaaaatagtatactaactatactattctttt 415
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 256 atatttcagtgtacactttaaatggcaaaatagtatactaactatactattctttt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 830
Length adjustment: 9
Effective length of query: 420
Effective length of database: 821
Effective search space:   344820
Effective search space used:   344820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)