Query= MSMg01no510_n10.b1 MSMg01no510_n10.b1 CHROMAT_FILE:
MSMg01no510_n10.b1 PHD_FILE: MSMg01no510_n10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:31 2005
(321 letters)
>mm_chr2_29642599_29643320
Length = 722
Score = 590 bits (305), Expect = e-173
Identities = 319/325 (98%), Gaps = 4/325 (1%)
Strand = Plus / Minus
Query: 1 tgcgtgagaccgtggagttgcaactgcttaaaggtgataactccgacgcggacccacggt 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 457 tgcgtgagaccgtggagttgcaactgcttaaaggtgagaactccgacgcggacccacggt 398
Query: 61 tttgctttagttctttctgatgtggagtgaggccacgtggttcgtttgccgggttgtagc 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 397 tttgctttagttctttctgatgtggagtgaggtcacgtggttcgtttgccgggttgtagc 338
Query: 121 tgtttcttgtttgtttgttttttttctcttgtacacatttcgttactacccactctccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tgtttcttgtttgtttgttttttttctcttgtacacatttcgttactacccactctccgc 278
Query: 181 tattttcctttagagaaattcattctatagtgttggg-tttttttcgcggtttctgttac 239
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 277 tattttcctttagagaaattcattctatagtgttgggttttttttcgcggtttctgttac 218
Query: 240 agagttagaatttgaac---ttttttttttttttttttttttgccttttgagacagggtc 296
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 agagttagaatttgaactttttttttttttttttttttttttgccttttgagacagggtc 158
Query: 297 ttttctaattaatccgaccttgaaa 321
|||||||||||||||||||||||||
Sbjct: 157 ttttctaattaatccgaccttgaaa 133
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 722
Length adjustment: 9
Effective length of query: 312
Effective length of database: 713
Effective search space: 222456
Effective search space used: 222456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_n10.g1 MSMg01no510_n10.g1 CHROMAT_FILE:
MSMg01no510_n10.g1 PHD_FILE: MSMg01no510_n10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:31 2005
(411 letters)
>mm_chr2_29505372_29506181
Length = 810
Score = 752 bits (389), Expect = 0.0
Identities = 404/411 (98%), Gaps = 5/411 (1%)
Strand = Plus / Plus
Query: 1 ggagggaaggctctggaaccttatccagactacaggctttggtgttttctttgccattga 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggagggaaggctctggaatcttatccagactacaggctttggtgttttctttgccattga 260
Query: 61 acaggctgaggcactaagtttaatggaaccatgctccctgcaaatgttctagccaaagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaggctgaggcactaagtttaatggaaccatgctccctgcaaatgttctagccaaagta 320
Query: 121 aagtgttttcagtgggagaaaaagtctgtttcatcattcccgttacaaactgatgtttag 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtgttttcagtgggagaaaa-gtctgtttcatcattcccgttacaaactgatgtttag 379
Query: 181 ccgtcgaatgtgtgacacaggcactgttctaggctcagggcatgaattgtgaaaacacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccgtcgaatgtgtgacacaggcactgttctaggctcagggcatgaattgtgaaaacacaa 439
Query: 241 atcactgctgccccctggagtctacaagtttgtacacaaactagtgctaggttgtctctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atcactgctgccccctggagtctacaagtttgtacacaaactagtgctaggttgtctctt 499
Query: 301 gggaggtaggtcctgtactggcagtgaagcgcggaggacggccagtgcttagggattcct 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 500 gggaggtaggtcctgtactggcattgaagcgcggaggacggccagtgcttagggattcct 559
Query: 361 agttttttgttttttgttttttttaaagatttatttatttattatatgtaa 411
||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 560 agttttttgtttttt----tttttaaagatttatttatttattatatgtaa 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 810
Length adjustment: 9
Effective length of query: 402
Effective length of database: 801
Effective search space: 322002
Effective search space used: 322002
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
