Query= MSMg01no511_h18.b1 MSMg01no511_h18.b1 CHROMAT_FILE:
MSMg01no511_h18.b1 PHD_FILE: MSMg01no511_h18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:22 2005
(683 letters)
>mm_chr2_82844483_82845565
Length = 1083
Score = 1180 bits (610), Expect = 0.0
Identities = 626/632 (99%), Gaps = 4/632 (0%)
Strand = Plus / Minus
Query: 48 atttggatggggagatctgagtgtgaagcaattgtgaatagggcaatgttttctgacgtt 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 atttggatggggagatctgagtgtgaagcaattgtgaatagggcaatgttttctgacgtt 1024
Query: 108 ccttaataatgccactcagtatctgatagaatatgaaaactgagatatttaacaattgga 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 ccttaataatgccactcagtatctgatagaatatgaaaactgagatatttaacaattgga 964
Query: 168 tcccagagtacagaaattagaggatattgaaaaactatttacctcaagactgtttgagtt 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 tcccagagtacagaaattagaggatattgaaaaactatttacctcaagactgtttgagtt 904
Query: 228 tccttcttgtggttcctgacaactttctgtaaagggcagaaaaaaatatttttcttacaa 287
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 903 tccttcttgtggttcctgacaactttctgtaaagggcag-aaaaaatatttttcttacaa 845
Query: 288 atatacaaaaataatacatatat--ataaatatacacatacatatatttgttgataaaat 345
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 844 atatacaaaaataatacatatataaataaatatacacatacatatatttgttgataaaat 785
Query: 346 acaatctttttactttaaatcacataatgtaggcatatagtggacatacaattggagcaa 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 acaatctttttactttaaatcacataatgtaggcatatagtggacatacaattggagcaa 725
Query: 406 atttgacacaaatgagaaccttagaatatagaacttgtatttgtcttctacttggaaatt 465
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 724 atttgacacaaatgagaaccttagaatatagaacttgtatttgtcgtctacttggaaatt 665
Query: 466 atgaaagatgattgttatgcatcaggagagacaaactctgtacttcagttgctacacatt 525
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 664 atgaaagatgattgttatgcatcaggagagacaagctctgtacttcagttgctacacatt 605
Query: 526 tatgcaaagccactcaaacagtgccacctttttttttaacctctaaaagagaaattactt 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tatgcaaagccactcaaacagtgccacctttttttttaacctctaaaagagaaattactt 545
Query: 586 tcatgataaatcttttttattagatattttcttcatttacatttcaaatgctatccccaa 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcatgataaatcttttttattagatattttcttcatttacatttcaaatgctatccccaa 485
Query: 646 agtcccctataacatgtgccgcc-cccccccc 676
||||||||||||||||||||||| ||||||||
Sbjct: 484 agtcccctataacatgtgccgccgcccccccc 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_h18.g1 MSMg01no511_h18.g1 CHROMAT_FILE:
MSMg01no511_h18.g1 PHD_FILE: MSMg01no511_h18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:22 2005
(526 letters)
>mm_chr2_82665763_82666684
Length = 922
Score = 990 bits (512), Expect = 0.0
Identities = 521/526 (99%), Gaps = 4/526 (0%)
Strand = Plus / Plus
Query: 1 aaacctcacagagacaaagaggatcctagtaaaaagatagcctgagcatccagagaggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaacctcacagagacaaagaggatcctagtaaaaagatagcctgagcatccagagaggcc 260
Query: 61 atttggaatctgtagcatgatataagcttacctatatagactaaaatttcatgataccga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttggaatctgtagcatgatataagcttacctatatagactaaaatttcatgataccga 320
Query: 121 ggaacgactaagaaaccgaaaagatttttgagactggaagaagtagaaatttcagttgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaacgactaagaaaccgaaaagatttttgagactggaagaagtagaaatttcagttgcc 380
Query: 181 cagacctaaagaccccctgtgaacacccagagcacttaatattaatttcggaagggtcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagacctaaagaccccctgtgaacacccagagcacttaatattaatttcggaagggtcac 440
Query: 241 atcgtaaaaataggatcaaacgttcactggaatcaggatcttcatcacctctgtataagc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 atcgtaaaaataggatcaaacgttcactggaatcaggatcttcatcacctctgtgtaagc 500
Query: 301 taatctcaaggaatcaaatctatgaactagcagttcattatatcccagatcaaagtccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taatctcaaggaatcaaatctatgaactagcagttcattatatcccagatcaaagtccac 560
Query: 361 caatttttaaatattgcaattaaaaaataatattgaatgtctaacatcttgttatgttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caatttttaaatattgcaattaaaaaataatattgaatgtctaacatcttgttatgttat 620
Query: 421 gtataaatagttcaaatctattaaataatcataaaaattctttcagaaaaatatcattgc 480
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 621 gtataaatagttcaaatctattaaataatcataaaaattc----agaaaaatatcattgc 676
Query: 481 tatgataataaattaaaaagaaatataaatattgtaagtatgccct 526
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tatgataataaattaaaaagaaatataaatattgtaagtatgccct 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 922
Length adjustment: 10
Effective length of query: 516
Effective length of database: 912
Effective search space: 470592
Effective search space used: 470592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
