XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCGCGGAATTCAAAGA
ATCCCCCCTTTGAGAGCTATTCATTCCTGGGTGTTCCCATGGCCATATGA
ATATACATATACATGTCGATACTTTTCTATTTTTCTTTTGTAAATCTTTT
TTTTCCGGGCCTTGAGAGAAGCCTTTACAAATCTCATGCTTAGGTAATGC
CCAGTAAGATTGATGTTTCAGCGGCTCTGACCAAGTGTGTCCGAAAAGCT
AGAGGTATCTGAACTCAGCCAATGAGAGAAGGAATGGAGTGGGCGTGGCC
TTGTCTTAACCAATATCCTCCACCCCTCTGTTTCTTTCCCGTTTCTAAGT
TCAGACTCCAGTTTCTGGCAGACAGGGAAGTGCTGAAGACCGGAGCTTCC
TCTTCTGTGACCAGGAGTCAGGGCACAAACTCCTTCCCTGTGTTCCCGCC
AGATCGCCAGGGGGCAGGCTGCTCCGGTATCACGGAAGTCCGGTCCGGAG
AATACCGCGCGTGAAAACCCAAGGTCCAAAGTAGGTGCTGTATCCGCCAC
AGTGCACTGAAGGGGCCGGGTTCGCTCCCCGGTGCTCTTGATCGCTTCCT
GCCCTTAGGTCTGGAAGTCTCTGTGGCCCCAGAAACCCCTGGCGGGCCCT
GCAGACCATTCTGTCTTTGTTGCCTTGGTTGGGCTGGTGAGATCGCTAGG
CCTGATTGACTACAGCGCCTTGAGCTCCTGCTGGGTTCTGGCTACACTTA
AGTCTGTGCCACGCTGCTN

TTTCCTCTCTTTTCTCTTTCTCCTCTTTTTCCTCATCCTCATCTTTCGCG
CATATCTCCGCGCCAACCCACAAATGTGATACGCGTGTGTTTGGCTTGCG
GAGCCGCCCACGCCGGAGGCGGTCAAAAAATTAATGGGTTTCGCGGGAAA
TACTCAATTCTGTGTAATACTAAAATACAAGAATCTCTAGGGGTCGGTCT
GGCTGCTGATATGCATACCCTGGGGACTGATAAGAAACCCAGGTACATGG
TTAAAAGGTGCCCCGCCGGGGGGGGCGCCTGGTTTGGTTCTTGATACTAA
AAGGTTGGGGTCCACTCTCACACCTACCTCATCAAAGGTCCTATATCGTG
GGTGAAAAAATTATATCCCCACTATAGCAAATCGAGAAAAAATAGAGTCT
CTCTCCTCCTCCGCTAATATAAGGACAAACGCCGCGCCTGAACACGTTTA
TTTAAATACCCTTCACATGAAATCGATAAGAATACTCTTATCTCCACCCC
ACAGGGGACTTTAACATAATCAGTTCTCCACTACGTGGTATCCTCAAAAG
TAGGGCGGCGTCCATAGTAATAATATCATACTAGTACCTCTCTTCCACCC
TTGTGGAGAACGGTACCTCCACGACGCCGCACAACTTATTTCCCCCTCAC
ATAATTAAAGAGAGGGCGCGGTAACTCCGTCTTTCTTGAGCTTCTATTTT
TATTCTTCCTCTGCTCATGTTTCCTTACTTATTAACTGAGACACGCCAAG
TATCGGCTTGTGCCGCTCCGCGCATATGCGTCCTAGACCCTGCTATCTGC
TACAATCGTAACAATGAGACTAATAAACATGAACCGAAATTATGTGTGCC
TCTATCCTACGCGATACGCAGCTGTATCGCGCGCTTCATGAAGCATTACC
AATCGCGCTCTCCTTTATGCCGAACCGGACACCCGTATGGATA

Query= MSMg01no512_c22.b1 MSMg01no512_c22.b1 CHROMAT_FILE:
MSMg01no512_c22.b1 PHD_FILE: MSMg01no512_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:15 2005
         (593 letters)



>mm_chr2_93689483_93690477
          Length = 995

 Score =  980 bits (507), Expect = 0.0
 Identities = 572/603 (94%), Gaps = 19/603 (3%)
 Strand = Plus / Minus

                                                                       
Query: 5   ggaattcaaagaa-tcccccctttgagagctattcattcctgggtgttcccatggccata 63
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 ggaattcaaagaagt-ccccctttgagagctattcattcctgggtgttcccatggccata 890

                                                                       
Query: 64  tgaatatacatatacatgtcgatacttttctatttttcttttgtaaatcttttttttccg 123
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 889 tgaatatacatatacatgtcgatacttttctatatttcttttgtaaatcttttttttccg 830

                                                                       
Query: 124 ggccttgagagaagcctttacaa---------------atctcatgcttaggtaatgccc 168
           |||||||||||||||||||||||               ||||||||||||||||||||||
Sbjct: 829 ggccttgagagaagcctttacaaatagatggcggggagatctcatgcttaggtaatgccc 770

                                                                       
Query: 169 agtaagattgatgtttcagcggctctgaccaagtgtgtccgaaaagctagaggtatctga 228
           || ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 769 aggaagattggtgtttcagcggctctgagcaagtgtgtccgaaaagctagaggtatctga 710

                                                                       
Query: 229 actcagccaatgagagaaggaatggagtgggcgtggccttgtcttaaccaatatcctcca 288
            |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 709 gctcagccaatgagagaaggaatggagtgggcgtggccttgtcttaaccaagatcctcca 650

                                                                       
Query: 289 cccctctgtttctttcccgtttctaagttcagactccagtttctggcagacagggaagtg 348
           |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 649 cccctctgtttctttcccatttctaagttcggactccagtttctggcagacagggaagtg 590

                                                                       
Query: 349 ctgaagaccggagcttcctcttctgtgaccaggagtcagggcacaaactccttccctgtg 408
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 589 ctgaagaccggagcttcctcttctgtgaccaggagtcagggcacagactccttccctgtg 530

                                                                       
Query: 409 ttcccgccagatcgccagggggcaggctgctccggtatcacggaagtccggtccggagaa 468
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 529 ttcccgccagatcgccagggggcaggctgctccggtatcacggaagtccgatccggagaa 470

                                                                       
Query: 469 ta-c-cgcgcgtgaaaacccaaggtccaaagtaggtgctgtatccgccacagtgcactga 526
           || | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 469 tatcgcgcgcgtgaaaacccaaggtccaaagtaggtgctgtatccgccacagtgcaccga 410

                                                                       
Query: 527 aggggccgggttcgctccccggtgctcttgatcgcttcctgcccttaggtctggaagtct 586
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aggggccgggttcgctccgcggtgctcttgatcgcttcctgcccttaggtctggaagtct 350

              
Query: 587 ctg 589
           |||
Sbjct: 349 ctg 347


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 995
Length adjustment: 10
Effective length of query: 583
Effective length of database: 985
Effective search space:   574255
Effective search space used:   574255
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)