TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTCCGGTACACTTACCTCATCTAATCAATGCTGATGCTTTTTTC
CCCCGCTGTCAGAACTAAGCACAGAATATTCAAGTGTTAACTAAGGAGGA
CAGAATGTAATGCTAGCAAAAAACAAAAAAACAAAAAAACAAAAAACAAA
AAAAAAAACAAACAAATAAAACAAAACAAAACAAAACAAAACTATGATCC
CTGTCTTATCTCAGTCTTCCTCCAGTTAATGATGTGAAATCACTCAAACA
CAGAATCTCACTGGGGCTCCCACTCAAAAGCTAAAGGTGTGTGCTGGCAA
ATAAAACATCATTGCCATAAAGACGACTGCTTTACATTTCAGCAGGGCTG
GGTTACACCCGAGTAGTTCCGTTATGTTGGGCTGTTTCTGCAATTTATGC
ATTTGCCAAAGTGTGCCTATTGACTTTTTTTCCCTGACACCATATTGTTT
TCATAAAACTTTTATCATTGTTGAAAACACCAGTCATTCCACTAAGCCTA
AACCACAGGGCATTTTGTTTCAAAGGCTATCCATTATTGGTACACTAGTT
ATATACTCTACTCTCTACTCACTTAGTCATTTTCATAAGTGCTTGACTGA
TGTTAATAAATGAGTAAGATAGGCAAAACACAAATTCTTTTTCAATCATC
GGCCTCTGTTTTGTATCAAATGGACCTTGCTCATCCTGTTCAGGATAAAA

NNCCTTAANNCNNNNNCCCCCTGTCCCCCCACTTTANNTNACCTATANAA
NGATCCCCCNAATTCTTTAAAAAATATTCTTAANGANATCTCCCATATAA
CCTGCATTAAANTGAACATTTTCTTGNTCCNANNNAAGAANCCCGCCTCC
TTTGNTTNNCCCTTTTCCCAATTGGACCCCGTTTCTGGNNNCCTCTGGCC
TCTGGGGGGGTTGTTTGTGTGGGTGTTGTTGTGTGGGTGGTGTGTTTTTG
GCTTGTGGGGGAGGGGGCGCTCCCCNNNNCCCCCCCCCTTTTTTTTCCCC
CCNNCCCTTCCCCCCATTTTCCCCCCCCCCTTGTTTAAACCCCNANNCCA
AAAAAAAAACCCCCCCCNCCCCCGATTTTCTCCAAAACCCCCCCCCCCCC
TAAAATCNCCCCCCCCCCCCCTTTTTNCCCCCCCCCCCCNNNCCCCCCCC
CTCAACCCCTCAAAAACCCCCCCAAAACTCCCCCCCCCCCCCCCCCCNCC
CCTCTTTTTTTCCTCTCTTACACAAATTTTACCCTCCCCCCCCCTTATAA
ACCCCCCCCCCCNNCCCCCCCNCCNNATTTCCCCCCCCTCTTATAAAAAA
ATACTTCCCCCTCTTTTTTTTTTTATNNTCCAAAAAAATTTTTTCTTTTT
CCCCCCCCTCCATAAAAACATTCCCCCCAATTTCCCTNTTCAAACCCCCC
CCCCCCCCCCACAAACAACTTCTTCTTTNNCCTCNTTCCCTTTTCTCTCC
AAANACACCCCCCCCCCATCCTTATCCTCTTTTTTCTNTCCTCCCTTCCC
CCCCTCCCTTATTTTTTTCTCTTTTATTTTG

Query= MSMg01no512_d08.b1 MSMg01no512_d08.b1 CHROMAT_FILE:
MSMg01no512_d08.b1 PHD_FILE: MSMg01no512_d08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:17 2005
         (609 letters)



>mm_chr2_79111848_79112858
          Length = 1011

 Score =  704 bits (364), Expect = 0.0
 Identities = 517/608 (85%), Gaps = 66/608 (10%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccggtacacttacctcatctaatcaatgctgat-gctttttt--cccccgctgtcagaa 57
           |||||||||||||||||||| ||||||||||| | ||||||||  |||||||||||||||
Sbjct: 201 tccggtacacttacctcatcgaatcaatgctg-tggcttttttcccccccgctgtcagaa 259

                                                                       
Query: 58  ctaagcacagaatattcaagtgttaactaaggaggacagaatgtaatgctagcaaaaaac 117
           |||||||||||||||||||||||||||||||||| |||||||||||||||||        
Sbjct: 260 ctaagcacagaatattcaagtgttaactaaggagaacagaatgtaatgctag-------- 311

                                                                       
Query: 118 aaaaaaacaaaaaaacaaaaaacaaaaaaaaaaacaaacaaataaaacaaaacaaaacaa 177
                                  | ||||||||||                         
Sbjct: 312 -----------------------agaaaaaaaaac------------------------- 323

                                                                       
Query: 178 aacaaaactatgatccctgtcttatctcagtcttcctccagttaatgatgtgaaatcact 237
             |    ||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 --c----ctatgatccccatcttatctcagtcttcctccagttaatgatgtgaaatcact 377

                                                                       
Query: 238 caaacacagaatctcactggggctcccactcaaaagctaaaggtgtgtgctggcaaataa 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caaacacagaatctcactggggctcccactcaaaagctaaaggtgtgtgctggcaaataa 437

                                                                       
Query: 298 aacatcattgccataaagacgactgctttacatttcagcagggctgggttacacccgagt 357
           ||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||
Sbjct: 438 aacatcattgccataaagacgactgctctacatttcagcagggctgggttgcacctgagt 497

                                                                       
Query: 358 agttccgttatgttgggctgtttctgcaatttatgcatttgccaaagtgtgcctattgac 417
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 498 agttctgttatgttgggctgtttctgcaatttatgcatttgccaaagtgtgcccattgac 557

                                                                       
Query: 418 tttttttccctgacaccatattgttttcataaaacttttatcattgttgaaaacaccagt 477
           |||||| |||  ||||| ||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 558 ttttttcccccaacaccgtattgttttcatagaactttcatcattgttgaaaacaccagt 617

                                                                       
Query: 478 cattccactaagcctaaaccacagggcattttgtttcaaaggctatccattattggtaca 537
           ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| 
Sbjct: 618 cattccactaagcctaaaccacagggcatgttgtttcaaaggctatgcattattggtacg 677

                                                                       
Query: 538 ctagttatatactctactctctactcacttagtcattttcataagtgcttgactgatgtt 597
           |||||||||||||||||| ||||||| || |||||||||||  |||||||| ||||||||
Sbjct: 678 ctagttatatactctactgtctactcgctcagtcattttcacgagtgcttggctgatgtt 737

                   
Query: 598 aataaatg 605
           ||||||||
Sbjct: 738 aataaatg 745


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1011
Length adjustment: 10
Effective length of query: 599
Effective length of database: 1001
Effective search space:   599599
Effective search space used:   599599
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)