Query= MSMg01no512_g14.b1 MSMg01no512_g14.b1 CHROMAT_FILE:
MSMg01no512_g14.b1 PHD_FILE: MSMg01no512_g14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:33 2005
(622 letters)
>mm_chr2_134115771_134116791
Length = 1021
Score = 1156 bits (598), Expect = 0.0
Identities = 616/622 (99%), Gaps = 1/622 (0%)
Strand = Plus / Minus
Query: 1 tgatatattttccatgaatgatctttccacactgcacttaactgtcaggtagagctagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 tgatatattttccatgaatgatctttccacactgcacttaactgtcaggtagagctagat 694
Query: 61 gctgctctggtgccccttccctgttacaagcaaagtcttatactgttgacaagagttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gctgctctggtgccccttccctgttacaagcaaagtcttatactgttgacaagagttctt 634
Query: 121 tgactgtttttgaggatcctagtgtatgatcaggagaggctactggcacactattcctct 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 633 tgactgtttttgaggatcctagtgtatgatcaggagaggctcctggcacactattcctct 574
Query: 181 catatcaaggctatgggcatactgtgcatttatttgctcatagtgtcagcaaatcttacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 catatcaaggctatgggcatactgtgcatttatttgctcatagtgtcagcaaatcttacc 514
Query: 241 tcctgccacataatcttgggaaaaatattcaaggaccttggacttgtgcctccagctttg 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tcctgccacataatcttggg-aaaatattcaaggaccttggacttgtgcctccagctttg 455
Query: 301 ttctggcttatcacatatctggaccttctattaaatgagcttttatcgtcttgcttttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ttctggcttatcacatatctggaccttctattaaatgagcttttatcgtcttgcttttta 395
Query: 361 tagactcctatgatttttcatgggatgttacttgattgaaggaaatcacataggagttat 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 394 tagactcctatgatttttcatgggatgttacttgattgaaggaaatcccataggagttat 335
Query: 421 agctcaccattaattcacttcttccactctcacttcaacactgatttacccagcaattac 480
||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 334 agctcaccattaattaacttcttccactctcacttcagcactgatttacccagcaattac 275
Query: 481 cctttgtcgattgcaagactatgcaccagataacagaaattctcagtttttaactcttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 cctttgtcgattgcaagactatgcaccagataacagaaattctcagtttttaactcttga 215
Query: 541 aaatgactttgagtgctggagagattgtacaatggttatgagtgattgctgttcttctga 600
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 214 aaatgactttgagtgctggagagattgcacaatggttatgagtgattgctgttcttctga 155
Query: 601 aggccagagttcatgttcaaac 622
||||||||||||||||||||||
Sbjct: 154 aggccagagttcatgttcaaac 133
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1021
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1011
Effective search space: 618732
Effective search space used: 618732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no512_g14.g1 MSMg01no512_g14.g1 CHROMAT_FILE:
MSMg01no512_g14.g1 PHD_FILE: MSMg01no512_g14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:33 2005
(586 letters)
>mm_chr2_133990192_133991177
Length = 986
Score = 1133 bits (586), Expect = 0.0
Identities = 586/586 (100%)
Strand = Plus / Plus
Query: 1 agtgctgatgtactctgaactactcttgtctccaaatacaaaactatcaacagtaatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgctgatgtactctgaactactcttgtctccaaatacaaaactatcaacagtaatgaa 260
Query: 61 gaaatgatcatgagaaaattccaatgtacagcaacaacacgtctccagagtatttgcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaatgatcatgagaaaattccaatgtacagcaacaacacgtctccagagtatttgcaaa 320
Query: 121 atgtccaacaaatctacaaagtctacgtaaagcactagaaacagaaacttgaatcagggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtccaacaaatctacaaagtctacgtaaagcactagaaacagaaacttgaatcagggg 380
Query: 181 atgcaaaagcatgaaatgaggaaatcatgttaattttgttgatgttggccacatttcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgcaaaagcatgaaatgaggaaatcatgttaattttgttgatgttggccacatttcttt 440
Query: 241 ctaaaatatcttcttatcattgtatcaccatgctgtgcatggggctgggaacccatcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaaaatatcttcttatcattgtatcaccatgctgtgcatggggctgggaacccatcatg 500
Query: 301 gatgggaatcattagttcaaagggaatctgataccaagctaaaatgcaaccattggcact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatgggaatcattagttcaaagggaatctgataccaagctaaaatgcaaccattggcact 560
Query: 361 tctcactcagtagggattttagtttatgtataagacccaacagaaattatcataacctac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctcactcagtagggattttagtttatgtataagacccaacagaaattatcataacctac 620
Query: 421 tgtatcacactcacagggaatgttttaggatgctgcaatgtgatttaaaaagcactcaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtatcacactcacagggaatgttttaggatgctgcaatgtgatttaaaaagcactcaag 680
Query: 481 catgcatgtctgtatttaattgtatgttgacaagtaaatatagtctttggttggggtcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catgcatgtctgtatttaattgtatgttgacaagtaaatatagtctttggttggggtcct 740
Query: 541 catggtacaaaggagggaccaagaccctgaaaacataacttgccaa 586
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 catggtacaaaggagggaccaagaccctgaaaacataacttgccaa 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
