Query= MSMg01no512_i17.b1 MSMg01no512_i17.b1 CHROMAT_FILE:
MSMg01no512_i17.b1 PHD_FILE: MSMg01no512_i17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:44 2005
(672 letters)
>mm_chr2_70912780_70913852
Length = 1073
Score = 1249 bits (646), Expect = 0.0
Identities = 661/666 (99%), Gaps = 1/666 (0%)
Strand = Plus / Plus
Query: 5 gaattctttactttcgaa-taaatagattattttgcatttcataatggaaataaactgtt 63
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttactagagaagtaaatagattattttgcatttcataatggaaataaactgtt 264
Query: 64 ggaaatttgcttctcaaaataaaggcccactcttcaagttgatatcattcaagctttttc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggaaatttgcttctcaaaataaaggcccactcttcaagttgatatcattcaagctttttc 324
Query: 124 tgacatactgtctatcttcagtacaagcaggccactgtaaggtttgttggtgacataacc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgacatactgtctatcttcagtacaagcaggccactgtaaggtttgttggtgacataacc 384
Query: 184 atagtaaccatagtaacactatgctcttggttagatgcattattattagaactccagttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atagtaaccatagtaacactatgctcttggttagatgcattattattagaactccagttc 444
Query: 244 acaaatacaccatatttagtggtaagaaatacttgtttccatttgtggtgttttatgttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acaaatacaccatatttagtggtaagaaatacttgtttccatttgtggtgttttatgttt 504
Query: 304 attttcactatgtttgtaagaagctggaagattagtgaacattttaagtatgtttccttt 363
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 505 attttcactatgtttgtaagaacctggaagattagtgaacattttaagtatgtttccttt 564
Query: 364 actggtaaactaactttcagtctaaatagattggaaagtctcagttcatgaaaagtttta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 actggtaaactaactttcagtctaaatagattggaaagtctcagttcatgaaaagtttta 624
Query: 424 tttaattgaatgctaggacagatggatattttgaactcatgaaggtagtgttttcagaag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttaattgaatgctaggacagatggatattttgaactcatgaaggtagtgttttcagaag 684
Query: 484 tgctttggagagctgcccataatgtattcttaccttgtaggcaggcacttcaccacccgt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgctttggagagctgcccataatgtattcttaccttgtaggcaggcacttcaccacccgt 744
Query: 544 tttgttgtacctcgcagtgttccgggttctgcccttttcacttgtagggattctagagat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tttgttgtacctcgcagtgttccgggttctgcccttttcacttgtagggattctagagat 804
Query: 604 caacaaaaaggtaagcacgagcctcctccctccctctgccttccttctccccactccctt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 caacaaaaaggtaagcacgagcctcctccctccctctgccttccttctccccactccctt 864
Query: 664 tttttt 669
||||||
Sbjct: 865 tttttt 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1073
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1063
Effective search space: 703706
Effective search space used: 703706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no512_i17.g1 MSMg01no512_i17.g1 CHROMAT_FILE:
MSMg01no512_i17.g1 PHD_FILE: MSMg01no512_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:44 2005
(569 letters)
>mm_chr2_71080558_71081526
Length = 969
Score = 677 bits (350), Expect = 0.0
Identities = 356/358 (99%)
Strand = Plus / Minus
Query: 1 ctaacttaaaccagggtatttgtggctcataaaagttattcaatttataagtatccctat 60
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 358 ctaacttaaaccagggcatttgtggctcataaaaattattcaatttataagtatccctat 299
Query: 61 aaacatttattagcagtgggaatttcccaatcattagtttaaaagtccagaccagacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aaacatttattagcagtgggaatttcccaatcattagtttaaaagtccagaccagacagg 239
Query: 121 aatgactttcccctaatattttttaaataaccttaaaaatctatctgtctgtccatccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aatgactttcccctaatattttttaaataaccttaaaaatctatctgtctgtccatccat 179
Query: 181 ccatccatccacctacctatctaatccatccatctacctacctatctaatatgtgtatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ccatccatccacctacctatctaatccatccatctacctacctatctaatatgtgtatgt 119
Query: 241 atgtgtgtaggcacatgcctgggcccatgtgtgtcacgtggacatgtgaatgtcagagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atgtgtgtaggcacatgcctgggcccatgtgtgtcacgtggacatgtgaatgtcagagaa 59
Query: 301 taacttacggaggtaagttcgcaatgtgggtcttggagatcaaagccagtcatcaggg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 taacttacggaggtaagttcgcaatgtgggtcttggagatcaaagccagtcatcaggg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
