XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATG
ATATGTCCTGTTGGATTGTGGTCTCTGCTCTTCTATATAGAAATTTCAGG
AGTGATCCCATTGATGCAAGTAGTCCTCTACGAAGAGAATACCAGGCAAC
ATGAACTGTAAACAGTCAAATGCCAAAGTGGGAAGAGATGAGGCGTGGTG
TGCATGTGGGCATGGCGGGATCCAAGCAAGAGCGAGACGTGGTGCAAGAG
CTTCATTTCAGGCGAGAAGGAAGTCATGGGAGGAGGTTGAGGGTCAGAGC
CACAGGATGCAAGTGTCTATGTTTCATGGTTAAGTTGGAGGTTGGGGGGG
AAATAGAGCAAAGGGCAGAAGTGGGAAATCAAGAGTCACTGCTGATTTAG
CCTTGTGTCACGGCGGCTGGACAGTGAGGATGGTGAGCAAAGGCTGGAGT
TACCATGTATTTCAATATGGAGTCAGCAAACTCAGCTTGGTGTGGTTATG
AGATTCAGGAAGAGGACAGTTGCCACACCTGTGACCTGGCTCTCCAAAGG
ACAATATTAACATATGTTGTGCTGGGCTAAATTAGTGAAAGCAGACTCTA
TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC
TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCATCCATCCA
TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATC
CATCTATCTATCTATCTATCTATC

ATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCTATTTAGCCTGTAGCCCATTTTTTTAATTGA
TTTATTTGGGTTTCTTGAGTCTAACTTCTTGAGTTCTGCATATATTTTGG
ATATTAGCCTTCTATCAGATATAGAGTCAGTGAATATCTTTTTCCAATCT
GTAGGTTGCCATTTTGTCCTATTGACTGTGTCCTTTGCTGTACATAAGCT
TTTCAGTTTCAAGAGGTCCAGTTGTTAATCTTAGAGCCTGAGACATTGGT
GTTCTGTTCAGGAAATTTTCCCCTGTGCCAATGTGTTTGAGGCTATTTCC
CACTTTCTCTTTTTTTAGATTCAGTGTATCTGGCTTTATTTTGAGGTTCT
TGATCCACTTGGACTTGAGATTTGTGCAAGAGTATATGTATATATTCATA
TATATATACTTATTCATATATATATATATTCTTATATATATACATATAAG
AATTTGCATTCTTCTACATGCAGATTGCCAGTTAGACCAGCACCATTTGT
TGAAGATGCTTTCTTTTTTTTTCCACTATGTGCTTTTGGTTTCTTTGTCA
AAGATCAAGTGTCCTTAGGTGTGTGGGTTTATTTCTGGGGCTTCTATTCT
ATTCTATTGAGCGGCGGGCATACAGTTTTTAACACTATTGCTCTGTAGCA
CCACTTGAGGTCAGGATCGTGATTCCTCCGCNAGTACATTTATTGTTGAG
AACTGTTTTTATATCCTCGGGTTTTTGTTTT

Query= MSMg01no513_d24.b1 MSMg01no513_d24.b1 CHROMAT_FILE:
MSMg01no513_d24.b1 PHD_FILE: MSMg01no513_d24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:41 2005
         (717 letters)



>mm_chr2_168987508_168988627
          Length = 1120

 Score = 1268 bits (656), Expect = 0.0
 Identities = 700/716 (97%), Gaps = 3/716 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatgatatgtcctgttggattgtggtctctgctcttctatatagaaatttcagga 64
           |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgataggacctgttggattgtggtctctgctcttctatatagaaatttcagga 264

                                                                       
Query: 65  gtgatcccattgatgcaagtagtcctctacgaagagaataccaggcaacatgaactgtaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgatcccattgatgcaagtagtcctctacgaagagaataccaggcaacatgaactgtaa 324

                                                                       
Query: 125 acagtcaaatgccaaagtgggaagagatgaggcgtggtgtgcatgtgggcatggcgggat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acagtcaaatgccaaagtgggaagagatgaggcgtggtgtgcatgtgggcatggcgggat 384

                                                                       
Query: 185 ccaagcaagagcgagacgtggtgcaagagcttcatttcaggcgagaaggaagtcatggga 244
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 385 ccaagcaagagcgagacgtggtgcaagagcttcatttcaggcaagaaggaagtcatggga 444

                                                                       
Query: 245 ggaggttgagggtcagagccacaggatgcaagtgtctatgtttcatggttaagttggagg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggaggttgagggtcagagccacaggatgcaagtgtctatgtttcatggttaagttggagg 504

                                                                       
Query: 305 ttggggggg---aaatagagcaaagggcagaagtgggaaatcaagagtcactgctgattt 361
           |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttggggggggggaaatagagcaaagggcagaagtgggaaatcaagagtcactgctgattt 564

                                                                       
Query: 362 agccttgtgtcacggcggctggacagtgaggatggtgagcaaaggctggagttaccatgt 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agccttgtgtcacggcggctggacagtgaggatggtgagcaaaggctggagttaccatgt 624

                                                                       
Query: 422 atttcaatatggagtcagcaaactcagcttggtgtggttatgagattcaggaagaggaca 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atttcaatatggagtcagcaaactcagcttggtgtggttatgagattcaggaagaggaca 684

                                                                       
Query: 482 gttgccacacctgtgacctggctctccaaaggacaatattaacatatgttgtgctgggct 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gttgccacacctgtgacctggctctccaaaggacaatattaacatatgttgtgctgggct 744

                                                                       
Query: 542 aaattagtgaaagcagactctatctatctatctatctatctatctatctatctatctatc 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaattagtgaaagcagactctatctatctatctatctatctatctatctatctatctatc 804

                                                                       
Query: 602 tatctatctatctatctatctatctatctatctatctatctatctatctatccatccatc 661
           |||||||||||||||| ||| ||| ||| ||| ||| ||| ||| ||| |||||||||||
Sbjct: 805 tatctatctatctatccatccatccatccatccatccatccatccatccatccatccatc 864

                                                                   
Query: 662 catccatccatccatccatccatccatccatccatccatccatccatccatccatc 717
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 catccatctatccatccatccatccatccatccatccatccatccatccatccatc 920


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 252
Number of extensions: 95
Number of successful extensions: 95
Number of sequences better than 10.0: 1
Number of HSP's gapped: 92
Number of HSP's successfully gapped: 1
Length of query: 717
Length of database: 1120
Length adjustment: 10
Effective length of query: 707
Effective length of database: 1110
Effective search space:   784770
Effective search space used:   784770
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)