XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGAC
ATGGTTCAATATATGAAAATCCATCAATGTAATCCACTATATAAACAAAC
TCAAAGGAAAAAAAAAACACATGTTCATCACATTAGATTTTGAAATGGCC
TTTGACAAAATACAACACCCATTCATGTTTAAAGTATTGGAGAGATCAGG
ATTTCATATCTAAGTATAATAAAAGCAATATACAGCAAACCAATAACAAA
CATCAAACTAAATGGAGAGAAACTCAAAGCAGTCTCATTAAAATCAGGGA
CAAGACAAACTGATCACTCTCTCCCTACCTATTTAATATAGTACTCAAAG
TTCTAACCAGAGCAATTAGACAACAAAAGGAGATCAAAGGGATACAATTT
TGGAAAGAGAAAGTCAAGGCATCACTATTTACAGATGATATGATAGTATA
CATAAGCAACCCCAAAAATTCTACTAGAGAGCTCTTACAACTGATAAACA
ACTTCAGCAAAGTGCCTGGATATAAAATTAACTCAAACAAATCAGTGGCC
TTCCTCTATTCAAAGGATAAACAGGAAGAGAAAGAAATTGGGGATAAGAC
GACCTTTACAATAGTCACAAATAATATAAGATATCTTGGTGTGACTCTAA
CCAAGCAAGTGAAAAATCTGTATGACAAAAACTTCAAGTCTCTGAAGAAA
GAAATCCAAGAAGACCTCAGAAGATGGAAAGAACTCCCATGCTCA

AGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCCCTAACTGACAATAGAAGCTGGGCCTGAGTCTT
CTGGGTGTCTCCATTTCCAAATAGTGGACCCCTGAATGCAATAAATTTTT
CTGGATAAATGCTCTTTACCTTTGTATACTATTTGAGTCTGGGGTATCAT
TCTTTGGTGAATCATGGACCCTTACATTTGGGGGCTTGTCTGGGATTTGC
TGAAGATCCTAACCCAAGTAGCTGAGCATTTTTTTTCTCTTCTGATTGGT
AAGTCTGGGTGTCAGTGACTATGTTTTCTTGTTCAGGTTCAATCTGGAGG
CCAAGAGGGACAGAGAGGGTGTATATTCTATTACCTGGCCTGGGACTACA
GACAACCCTCCTGAACACCATCTGGTAGAACTTTCTAGTTATCATCTGAT
TTCTGAATTGGCTATGGGTCTGTGGGCCTTCTATGTACAGAAAGGAAGAC
TGAGACAGCCTTTTATTTTTGGTCTTGCTATCCCAGGAACATCTTTCTAT
ATTTCTGTGTATTTTATGTGCTGTGGATTATTTGTTTTCCTCTCTTACCT
TGAGAAACACCATGGGCAGACAGCCAGCTCCACTCTACTGGACCTAACCC
AGTTACACTTCAAGGACTTCAGTTGCCTGGCAGAGAATCTATGCTTAACT
GTACAGTCAAGAAAACTAACTGTTTTTTGCAGAAACAAATGGCCAGCAGG
T

Query= MSMg01no513_k11.g1 MSMg01no513_k11.g1 CHROMAT_FILE:
MSMg01no513_k11.g1 PHD_FILE: MSMg01no513_k11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:13 2005
         (680 letters)



>mm_chr2_122712298_122713377
          Length = 1080

 Score = 1315 bits (680), Expect = 0.0
 Identities = 680/680 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccctaactgacaatagaagctgggcctgagtcttctgggtgtctccatttccaaatagtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctaactgacaatagaagctgggcctgagtcttctgggtgtctccatttccaaatagtg 260

                                                                       
Query: 61  gacccctgaatgcaataaatttttctggataaatgctctttacctttgtatactatttga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacccctgaatgcaataaatttttctggataaatgctctttacctttgtatactatttga 320

                                                                       
Query: 121 gtctggggtatcattctttggtgaatcatggacccttacatttgggggcttgtctgggat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctggggtatcattctttggtgaatcatggacccttacatttgggggcttgtctgggat 380

                                                                       
Query: 181 ttgctgaagatcctaacccaagtagctgagcattttttttctcttctgattggtaagtct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgctgaagatcctaacccaagtagctgagcattttttttctcttctgattggtaagtct 440

                                                                       
Query: 241 gggtgtcagtgactatgttttcttgttcaggttcaatctggaggccaagagggacagaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggtgtcagtgactatgttttcttgttcaggttcaatctggaggccaagagggacagaga 500

                                                                       
Query: 301 gggtgtatattctattacctggcctgggactacagacaaccctcctgaacaccatctggt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggtgtatattctattacctggcctgggactacagacaaccctcctgaacaccatctggt 560

                                                                       
Query: 361 agaactttctagttatcatctgatttctgaattggctatgggtctgtgggccttctatgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaactttctagttatcatctgatttctgaattggctatgggtctgtgggccttctatgt 620

                                                                       
Query: 421 acagaaaggaagactgagacagccttttatttttggtcttgctatcccaggaacatcttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acagaaaggaagactgagacagccttttatttttggtcttgctatcccaggaacatcttt 680

                                                                       
Query: 481 ctatatttctgtgtattttatgtgctgtggattatttgttttcctctcttaccttgagaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctatatttctgtgtattttatgtgctgtggattatttgttttcctctcttaccttgagaa 740

                                                                       
Query: 541 acaccatgggcagacagccagctccactctactggacctaacccagttacacttcaagga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acaccatgggcagacagccagctccactctactggacctaacccagttacacttcaagga 800

                                                                       
Query: 601 cttcagttgcctggcagagaatctatgcttaactgtacagtcaagaaaactaactgtttt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cttcagttgcctggcagagaatctatgcttaactgtacagtcaagaaaactaactgtttt 860

                               
Query: 661 ttgcagaaacaaatggccag 680
           ||||||||||||||||||||
Sbjct: 861 ttgcagaaacaaatggccag 880


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space:   716900
Effective search space used:   716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)