XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TTATGGGCTTTCACTGTAAGACACAGTCTTGGAGAACTATTGCAGACCTT
AACATTCCTATATGCTTGAATTGGGACTCTATGGATTTCCTTTTCTATTC
ACAATGTTAAATATTAAAGACAATATGCTAAAATGGACCTCTAGTGTGAA
TTTTCTAGAACTTGAATATGTCATTAGGCTATTTTTAATACATAGACACC
ACTTTCAAAATAAATTGTTACCACACAGTGAGGGACTAGGCATATTACTT
TCCACTTCTGATGTTCCTGAGACTTCACAGATGTCCACGGTGCCTACCCA
TTTTCAACACAGAAGTTCTCTATGCCGGATGCTGTTCGGTCCTGTTTTGT
CCCCCTTTGTCCATGTTCTTCGCCTTGCAGTTTCCAGGCAAGATGCATAT
GAGCTCTTCATTGTTTGCATCCACCCTGCCACCTACTGCTGTGGGACTGT
ACTTGGGGATATTATGGCTGCAGGCGGGCTCTCTGTTTTCACCTGATCTG
ACAGCACGCCCAGCTAGCTTCCAGCTTCTATTCTTTATATATTTATTCAT
GATGCCCTTATCTCTAGGTGATATAGCTCTCCACCAACTTATAACCATAT
TCCACTACCCAAACTCTTACTTTGCAGTTTTGATCAGTGGAACATTCTTT
AGAGTATGGTCGTCATGCACAGCCTCTACCTGC

GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAA
CACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAA
AACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATAAAAA
ATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTC
CTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGT
CTGGAGGTTCCTCAGAAATTGGACATAGTACTACCGGAGGATCCAGCAAT
ACCTCTCCTTGGTATATATCCAGAAGATGCCCCAATGGGTAAGAAGGACA
CATGTTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGG
AAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTA
CATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGA
AATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA
ACACATTCACAAAGAAACTCACACAATATGTACTCACTGATAAGTGGATA
TTAGCCCCAAACCTAGGATACCCAAGATATAAGATACAATTTGCTAAACA
CATGAAACTCAAGAAGAATGAAGACTGAAGTGTGGACACTATGCCCCC

Query= MSMg01no514_a06.b1 MSMg01no514_a06.b1 CHROMAT_FILE:
MSMg01no514_a06.b1 PHD_FILE: MSMg01no514_a06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:44 2005
         (572 letters)



>mm_chr2_134783747_134784718
          Length = 972

 Score = 1091 bits (564), Expect = 0.0
 Identities = 570/572 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtaagacacagtcttggagaactattgcagaccttaacattcctatatgcttgaattgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtaagacacagtcttggagaactattgcagaccttaacattcctatatgcttgaattgg 260

                                                                       
Query: 61  gactctatggatttccttttctattcacaatgttaaatattaaagacaatatgctaaaat 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactctttggatttccttttctattcacaatgttaaatattaaagacaatatgctaaaat 320

                                                                       
Query: 121 ggacctctagtgtgaattttctagaacttgaatatgtcattaggctatttttaatacata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggacctctagtgtgaattttctagaacttgaatatgtcattaggctatttttaatacata 380

                                                                       
Query: 181 gacaccactttcaaaataaattgttaccacacagtgagggactaggcatattactttcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacaccactttcaaaataaattgttaccacacagtgagggactaggcatattactttcca 440

                                                                       
Query: 241 cttctgatgttcctgagacttcacagatgtccacggtgcctacccattttcaacacagaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttctgatgttcctgagacttcacagatgtccacggtgcctacccattttcaacacagaa 500

                                                                       
Query: 301 gttctctatgccggatgctgttcggtcctgttttgtccccctttgtccatgttcttcgcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttctctatgccggatgctgttcggtcctgttttgtccccctttgtccatgttcttcgcc 560

                                                                       
Query: 361 ttgcagtttccaggcaagatgcatatgagctcttcattgtttgcatccaccctgccacct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgcagtttccaggcaagatgcatatgagctcttcattgtttgcatccaccctgccacct 620

                                                                       
Query: 421 actgctgtgggactgtacttggggatattatggctgcaggcgggctctctgttttcacct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 621 actgctgtgggactgtacttggggatattatggctgcaggcgggctctctgttttcatct 680

                                                                       
Query: 481 gatctgacagcacgcccagctagcttccagcttctattctttatatatttattcatgatg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gatctgacagcacgcccagctagcttccagcttctattctttatatatttattcatgatg 740

                                           
Query: 541 cccttatctctaggtgatatagctctccacca 572
           ||||||||||||||||||||||||||||||||
Sbjct: 741 cccttatctctaggtgatatagctctccacca 772


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)