Query= MSMg01no514_d07.b1 MSMg01no514_d07.b1 CHROMAT_FILE:
MSMg01no514_d07.b1 PHD_FILE: MSMg01no514_d07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:00 2005
(646 letters)
>mm_chr2_137789773_137790820
Length = 1048
Score = 1004 bits (519), Expect = 0.0
Identities = 597/623 (95%), Gaps = 3/623 (0%)
Strand = Plus / Minus
Query: 26 ctagaaagagattctgacagcatctggattttttttgttgttgttttgtttttgtttttg 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 ctagaaagagattctgacagcatctggattttttttgttgttgttttgtttttgtttttg 989
Query: 86 ttttttgagacagggtttctctgtatagccctggctgtcctggagctctctttgtagacc 145
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 988 -tttttgagacagggtttctctgtatagccctggctgtcctggaactcactttgtagacc 930
Query: 146 aggctggcctcgaactcagaaattcacctgcctctgcctcccaagtgctgggattaaagg 205
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 929 agactggcctcgaactcagaaattcacctgtctctgcctcccaagtgctgggattaaagg 870
Query: 206 cgtgcaccatcacacctggctagcatctggattttaagatgcttaaaaactct-aaaata 264
||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| |
Sbjct: 869 agtgtgccatcacacctggctagcatctggattttaagatgcttaaaaattctaaaaaaa 810
Query: 265 ctcttaaaaactctaataatacctttgcattaaatgactaaaatcatgatttttttt-tt 323
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 809 atcttaaaaactctaataatacctttgcattaaatgactaaaattatgattttttttctt 750
Query: 324 agagcagtgaagaatcaatgcagactccaagcttttctttccaaaaaggctacaacaggc 383
||| ||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| ||
Sbjct: 749 agaacagtgaagaatcattgcagactccaagcttttcttaccaaaaaggctacgacaagc 690
Query: 384 atttcaagcttttgaaggcttccatgatgcctgtcaaatgctaaccatctactctgtcac 443
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 689 atttcaagcttttgaaggcttgcatgatgcctgtcaaatggtaaccatctactctgtcac 630
Query: 444 taccgggatttctagttagaggagtaagggcaatatcaagcaaaaacacttaatctgacc 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 629 taccgggatttctagttagaggagtaagggcaatatcaagcaaaaacacttaatctgccc 570
Query: 504 tggaaagacatcttaggaagcatctcacagtttacttgcttgtctttaaacaattagata 563
| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttgaaaaacatcttaggaagcatctcacagtttacttgcttgtctttaaacaattagata 510
Query: 564 ttcagcaagcattttcgtacctcttcccatctcattctagtagttttgatgccctgttca 623
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 509 ttcagcaagcattttcatacctcttcccatctcagtctagtagttttgatgccctgttca 450
Query: 624 tctgtagaccacaaagtccatta 646
|||||||||||||||||||||||
Sbjct: 449 tctgtagaccacaaagtccatta 427
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1048
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1038
Effective search space: 660168
Effective search space used: 660168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_d07.g1 MSMg01no514_d07.g1 CHROMAT_FILE:
MSMg01no514_d07.g1 PHD_FILE: MSMg01no514_d07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:01 2005
(624 letters)
>mm_chr2_137650575_137651598
Length = 1024
Score = 1201 bits (621), Expect = 0.0
Identities = 621/621 (100%)
Strand = Plus / Plus
Query: 1 ttgctgattggtggggacatcaagttccttgaggaaaatttcatctttaccatcaggata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgctgattggtggggacatcaagttccttgaggaaaatttcatctttaccatcaggata 260
Query: 61 tctaatttattcttcttgttgtttctttcttgttcatgacttcctagaaaacttctacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctaatttattcttcttgttgtttctttcttgttcatgacttcctagaaaacttctacca 320
Query: 121 atagcaactatcactaccaccaccaaccaataacaaccaacaacaacccaactgattctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagcaactatcactaccaccaccaaccaataacaaccaacaacaacccaactgattctt 380
Query: 181 ggagttgaatttctataacctctgaaaagaccccagaattccagcagtcacacacttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagttgaatttctataacctctgaaaagaccccagaattccagcagtcacacacttgaa 440
Query: 241 aaaaaaatgtctgcagctggcaaaaatcacattcctgctagagcatgagaaaaatcatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaaaatgtctgcagctggcaaaaatcacattcctgctagagcatgagaaaaatcatag 500
Query: 301 tctgctgctatggacaatctaaagaaaatcacccagggtccagattttgtttagatattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgctgctatggacaatctaaagaaaatcacccagggtccagattttgtttagatattt 560
Query: 361 aaacctttagcttaaatttgtacctatcactttattaaactaacagaaaaacctaactgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaacctttagcttaaatttgtacctatcactttattaaactaacagaaaaacctaactgg 620
Query: 421 accataatgttttgaaaatatttgccatgctgcagacaatgcaaaagaaaaagaataaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 accataatgttttgaaaatatttgccatgctgcagacaatgcaaaagaaaaagaataaaa 680
Query: 481 tgtaattatagaggcatatctaggggcatttagcttaagacgactttatccattaaaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtaattatagaggcatatctaggggcatttagcttaagacgactttatccattaaaaat 740
Query: 541 tgaatgtggtttttatatgaaatctatgcaagtgtacctttggctactctgaacaaactc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgaatgtggtttttatatgaaatctatgcaagtgtacctttggctactctgaacaaactc 800
Query: 601 tggcatagttcaactaaaaat 621
|||||||||||||||||||||
Sbjct: 801 tggcatagttcaactaaaaat 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
