Query= MSMg01no514_i24.b1 MSMg01no514_i24.b1 CHROMAT_FILE:
MSMg01no514_i24.b1 PHD_FILE: MSMg01no514_i24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:30 2005
(594 letters)
>mm_chr2_167763904_167764897
Length = 994
Score = 1096 bits (567), Expect = 0.0
Identities = 585/591 (98%)
Strand = Plus / Plus
Query: 4 ggaattccgtcctgggtcttgtgcactgcctgatgttgccctgtgcttgttagaactgcc 63
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccgtcctgggtcttgtacactgcctgatgttgccctgtgcttgttagaactgcc 263
Query: 64 actatgtatcttggtccatcccagagcccacatgccctgtggtcactgactgtggcaccc 123
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 actctgtatcttggtccatcccagagcccacatgccctgtggtcactgactgtggcaccc 323
Query: 124 acctggcataaagtaagtattctctcaagtgtggtgtggacatggctgcccagagattta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acctggcataaagtaagtattctctcaagtgtggtgtggacatggctgcccagagattta 383
Query: 184 gtggctgtggtcccctgtaccaagctagtgatggggtcaggaagatttgcacagagggcc 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 384 gtggctgtggtcccctgtaccaagctagtgatggggtcaggaagatttgcacagagagcc 443
Query: 244 caacagtagggttcctgccatgggaagccctgtatttgagccgtgggccaaagaagtaac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caacagtagggttcctgccatgggaagccctgtatttgagccgtgggccaaagaagtaac 503
Query: 304 ttgccttcatgtggcttcccagagaaactgctgagtatgctgagaatcgttgcatctgcc 363
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 504 ttgccttcatgtggcttcccagagaaactgctgagtatgctgagactcgttgcatctgcc 563
Query: 364 cacctcacagaagtctgaggtgtgacagtgttccctctgtgtgacaggctcagtagacag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cacctcacagaagtctgaggtgtgacagtgttccctctgtgtgacaggctcagtagacag 623
Query: 424 cggagtgacaccacagctttctctccaggcctagtgagctcctctactcaagccactctt 483
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 624 cggagtggcaccacagctttctctccaggcctagtgagctcctctactcaagtcactctt 683
Query: 484 gacatgattaatttttggaaataagatatgtttctctgtcagtcaacaaccttaccaatc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gacatgattaatttttggaaataagatatgtttctctgtcagtcaacaaccttaccaatc 743
Query: 544 cttgtatttcttgaactccagttagtaaaggcaagcattgttcacctttag 594
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cttgtatttcttgaactccagttagtaaaggcaagcattgttcacctttag 794
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_i24.g1 MSMg01no514_i24.g1 CHROMAT_FILE:
MSMg01no514_i24.g1 PHD_FILE: MSMg01no514_i24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:30 2005
(598 letters)
>mm_chr2_167925105_167926102
Length = 998
Score = 1149 bits (594), Expect = 0.0
Identities = 598/600 (99%), Gaps = 2/600 (0%)
Strand = Plus / Minus
Query: 1 aacagtcacaggctcactgcacccagcctccgccaggcgcctgcagataactcgctcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 aacagtcacaggctcactgcacccagcctccgccaggcgcctgcagataactcgctcagt 702
Query: 61 cagtgcccttcattggatcaagacttcatttctgccggctcttactacgaggaaaaagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 cagtgcccttcattggatcaagacttcatttctgccggctcttactacgaggaaaaagtc 642
Query: 121 cttcaactcggagtcagtacacacctatgaggcacccacactcggccaccacaaggttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 cttcaactcggagtcagtacacacctatgaggcacccacactcggccaccacaaggttaa 582
Query: 181 gaaataaataactgtccccctcagagccttgggcctcagggaagtctgagccacacacgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gaaataaataactgtccccctcagagccttgggcctcagggaagtctgagccacacacgt 522
Query: 241 gggtctcgctgactgtgcatgcaacaggagggagccaggtaagggaagacaactgcggtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gggtctcgctgactgtgcatgcaacaggagggagccaggtaagggaagacaactgcggtc 462
Query: 301 ccctcatcccaaatggacgcacagaagagaataaatagactcaaataatcaccagccctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ccctcatcccaaatggacgcacagaagagaataaatagactcaaataatcaccagccctg 402
Query: 361 cgagtggtgtacttgacacgggtttccccaaatgtgggcagcaccctagaatccccagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 cgagtggtgtacttgacacgggtttccccaaatgtgggcagcaccctagaatccccagga 342
Query: 421 agaaaactccgtcttttgaataaaaagtgcacatctatatcgtgtgtaagtctcttaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 agaaaactccgtcttttgaataaaaagtgcacatctatatcgtgtgtaagtctcttaacc 282
Query: 481 tgggggcatttttatcccatgatccacactgtctggtacactgaagagtgtgggagtcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tgggggcatttttatcccatgatccacactgtctggtacactgaagagtgtgggagtcaa 222
Query: 541 ctaactatgctatcacctacccacaaacacacacacacacacaca--tacaccacacata 598
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 221 ctaactatgctatcacctacccacaaacacacacacacacacacacatacaccacacata 162
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
