ACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGG
AATTCTTTCTGCCTCCCACATGTCCCACCTTCTATTTCCTGCCATAGCCA
CAGGATTTTTAATTTACAAGTGGTGTATCCATACAATACACAAGATATTC
ATTCTCTACACCTGAATATCCCCTATCTTACTTGGGACTTCTGGAGACAG
TTGTCCCAGTAACCTTTGCACACACAGAACTGAACTTATAAATCACTACA
CTTTGTCTCATTCTCTCTTTCTATTATGTGTGGTATATGCATAGATGTGT
GTGCATGGTTGTAAAAGTATCACATGTGTCAAGAAAGGCATTTGCTCTGT
CAGTCACTTCCTTATAACATTGAAAGAAGGTTTCTCATTGAATCTGGAGC
TAGTGTGATGAGCAGCTGACTAGCAAGTTCCTTCAGAGTGCTAGGGTCAC
AGGTTCACATGGGGCCACACCCTACTTTTTTTAAAAAAAGATTTATTTAT
TATTATACATAAGTAGGCTGTAGCTGTCTTCAGACATACCAGAAGAGGGA
GTCAGATCTTATCACAGTTGGTTGTGAGCCACCAAGTGGTTGCTGGGACT
TGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTACCTGCTGAGCCA
TCTCTCCAGCCCCACACCCTACTTTTTATGTGGGTGCTGGGGATTTGAAC
TTAGACCCTTATGCTGCTTCAGGCAGTGATCTCACTCACTGAGCCATTGT
CCAGCCCTCAGCCCGATCTTTTTTT

CCATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAGGTTCATACCTAAACATGATAA
AAGCAATCTACAGCAAATCAGTAGCCAACATCAAAGTAAATGGTGAGAAG
CTGGAAGCAATCCCACTAAAATCAGGGACAAGAGAAGACTGCTCACTCTC
TCCCTACCTATTCAATATAGTACTTGAAGTCCTAGACATAGCGATTAGAA
AACAAAAGGAGATCAAAGGGATACAAATTGGAAAGGAAGAAGGCAAAATA
TCACTATTTGCAGATGATATGATAGTATACATGTGACCCTAAAAATTCCA
GCAGAGAACTCCTAAACCTGATAAACAGCTTCAGTACAGTAGCTGGATAT
AAAATTAAATCAAACAAATCAGTGGCCTTTCTCTACACAAAGGATAAACA
GGTTGAGAAAGAAATTAGGGAAATAACACCCTTCACAATAGTCACAAATA
ATATAAAATACCTTGGTGTGACTCTAACTAAGAATGTGAAAGATCTGTAG
GATAAGAACTTCAAGTCTCTGAAGAAAGCAATTGAAGATCTCAGAAGATG
GAAAGATTTCCCATGCTCATGTATTGGCAGGATTACTATAGTCAAAATGG
CTATCCTTTCTGAAAGCAATCTACAGATTCAATGCAATCCTCATCAAAAT
TTCAACTCAATTCTCCACTGAGTTAGAAAGGGCAATTTTCAAATTCATCT
GGAATAACAAAAAACCTAGGATAGCAAAATCTA

Query= MSMg01no515_a13.b1 MSMg01no515_a13.b1 CHROMAT_FILE:
MSMg01no515_a13.b1 PHD_FILE: MSMg01no515_a13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:10 2005
         (677 letters)



>mm_chr2_21083831_21084907
          Length = 1077

 Score = 1056 bits (546), Expect = 0.0
 Identities = 646/702 (92%), Gaps = 38/702 (5%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattctttctgcctcccacatgtcccaccttctatttcctgccatagccacaggatttt 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctttctgcctcccacatgtcccaccttctatttcctgccatagccacaggatttt 266

                                                                       
Query: 67  taatttacaagtggtgtatccatacaatacacaagatattcattctctacacctgaatat 126
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 267 taatttacaagtggtgtatccatacaatacacaagatattcattctctatacctgaatat 326

                                                                       
Query: 127 cccctatcttacttgggacttctggagacagttgtcccagtaacctttgcacacacagaa 186
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 327 cccctatcttacttgggacttctggagacagttgtcccagtaacctttgcacgcacagaa 386

                                                                       
Query: 187 ctgaacttataaatcactacactttgtctcattctctctttct--------attatgtgt 238
           |||||||||||||||||||||||||||||||||||||||||||        |||||||||
Sbjct: 387 ctgaacttataaatcactacactttgtctcattctctctttctgactttctattatgtgt 446

                                                                       
Query: 239 ggtatatgcatagatgtgtgtgcatggttgtaaaagtatcacatgtgtcaagaaaggcat 298
           ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 447 ggtatatgcataggtgtgtgtgaatggttgtaaaagtatcacatgtgtcaagaaaggcat 506

                                                                       
Query: 299 ttgctctgtcagtcacttccttataacattgaaagaaggtttctcattgaatctggagct 358
            ||||||||||    |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 507 ctgctctgtca----cttccttataacgttgaaagaaggtttctcattgaatctggagct 562

                                                                       
Query: 359 agtgtgatgagcagctgactagcaagttcc-----------------------ttcagag 395
           ||| ||||||||||||||||||||||||||                       |||||||
Sbjct: 563 agtatgatgagcagctgactagcaagttccagtgctgctcctgtcttcattccttcagag 622

                                                                       
Query: 396 tgctagggtcacaggttcacatggggccacaccctactttttttaaaaaaagatttattt 455
           |||||| |||||||| |||||||||||||||||||||||||||| |||   |||||||||
Sbjct: 623 tgctagtgtcacaggctcacatggggccacaccctacttttttttaaa---gatttattt 679

                                                                       
Query: 456 attattatacataagtaggctgtagctgtcttcagacataccagaagagggagtcagatc 515
           |||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 680 attattatacataagtacactgtagctgtcttcagacataccagaagagggaatcagatc 739

                                                                       
Query: 516 ttatcacagttggttgtgagccaccaagtggttgctgggacttgaactcaggacctttgg 575
           | |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 740 tcatcacagttggttgtgagccaccatgtggttgctgggacttgaactcaggacttttgg 799

                                                                       
Query: 576 aagagcagtcagtgctcttacctgctgagccatctctccagccccacaccctacttttta 635
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aagagcagtcagtgctcttacctgctgagccatctctccagccccacaccctacttttta 859

                                                     
Query: 636 tgtgggtgctggggatttgaacttagacccttatgctgcttc 677
           ||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 860 tgtaggtgctggggatttgtacttagacccttatgctgcttc 901


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space:   711689
Effective search space used:   711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)