Query= MSMg01no515_d19.b1 MSMg01no515_d19.b1 CHROMAT_FILE:
MSMg01no515_d19.b1 PHD_FILE: MSMg01no515_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:28 2005
(654 letters)
>mm_chr2_20924669_20925722
Length = 1054
Score = 1201 bits (621), Expect = 0.0
Identities = 643/653 (98%), Gaps = 6/653 (0%)
Strand = Plus / Plus
Query: 5 gaattctacactatttc---ggagaaaaggttggaatggctgaccaccaagaacttttcc 61
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctacacta---caagggagaaaaggttggaatggctgaccaccaagaacttttcc 261
Query: 62 atggtgtgcaactgggaagccatgtaattcatctagtctgtggtcactgtggcctccctc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atggtgtgcaactgggaagccatgtaattcatctagtctgtggtcactgtggcctccctc 321
Query: 122 agacctaaatagcttaaatatgcacagcactgccctgggttcaaatacagagtacatgca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agacctaaatagcttaaatatgcacagcactgccctgggttcaaatacagagtacatgca 381
Query: 182 ctattaggagagaaggctaaatgtatagagctgttgctaagaaaattggcttaccaaacc 241
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 382 ctattaggagagaaggctaaatgtatagagctgttgctaagaaaatcggcttaccaaacc 441
Query: 242 tacactgggtacttcccaggtccagcactagctggagacaagaggtagaactcatattgt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tacactgggtacttcccaggtccagcactagctggagacaagaggtagaactcatattgt 501
Query: 302 tttcaggtgagtggtgaaaacagatgctcacccatgatatgtattaagatggagccagta 361
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 502 tttcaggtgagtggtgaaaacagatactcacccatgatatgtattaagatggagccagta 561
Query: 362 ccatggtacttgggtggtagctctgaggaagaagagctaactttgtctggaggcagcgta 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ccatggtacttgggtggtagctctgaggaagaagagctaactttgtctggaggcagcgta 621
Query: 422 gaagcctcactaaatgacaccacagggtagtttaagcttcagggtgagtcagctgagagg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaagcctcactaaatgacaccacagggtagtttaagcttcagggtgagtcagctgagagg 681
Query: 482 aaggcatggaggaagacaccctaggtgtcagggggagcaaatgagacagtgccttagctc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 aaggcatggaggaagacaccctaggtgtcagggggagcaaatgagacagtgccttagctc 741
Query: 542 cagagagctggagaagtggtggcacattcggggagctgcagacacttcattggtgtcgaa 601
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 742 cagagagctggagaagtggtggcacatttggggagctgcagacacttcattggtgtcgaa 801
Query: 602 gcttaccacacaagagagtggtctaagaactgcatggtggctcgactgggaag 654
||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 802 gcttaccacacaagagagtggtccaagaactgcatggtggctcgactgggaag 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_d19.g1 MSMg01no515_d19.g1 CHROMAT_FILE:
MSMg01no515_d19.g1 PHD_FILE: MSMg01no515_d19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:28 2005
(596 letters)
>mm_chr2_21104557_21105552
Length = 996
Score = 1137 bits (588), Expect = 0.0
Identities = 594/596 (99%)
Strand = Plus / Minus
Query: 1 agtggttatatctctgtgggtttatttctgggtcctctcttttattccatcagtttgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 agtggttatatctctgtgggtttatttctgggtcctctcttttattccatcagtttgcat 925
Query: 61 atctgcatttaagccagtaccaagctgtttttgttactgtagctctctaatatagtctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 atctgcatttaagccagtaccaagctgtttttgttactgtagctctctaatatagtctga 865
Query: 121 aatcaggcattgagagtcctccagcatcactcttttgataagaattgctttggctattga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 aatcaggcattgagagtcctccagcatcactcttttgataagaattgctttggctattga 805
Query: 181 aggcccttgaagattagaaactgacacttacatatgttctggggtggaggcagggtcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aggcccttgaagattagaaactgacacttacatatgttctggggtggaggcagggtcagt 745
Query: 241 tgaactagtggactcccttcctttcccagctttacactgctgctgagtcaatactgagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgaactagtggactcccttcctttcccagctttacactgctgctgagtcaatactgagaa 685
Query: 301 accagatgttcaccaggtctgtctttactttggtggctttactcttcttctcaggaatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 accagatgttcaccaggtctgtctttactttggtggctttactcttcttctcaggaatct 625
Query: 361 ttgctggccacatgtaacttttcagcctgtgggccaggcaattgtctcatcctttacata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttgctggccacatgtaacttttcagcctgtgggccaggcaattgtctcatcctttacata 565
Query: 421 catgctgtactgcatccctgtgatagctagtgttctagctggagatgtctcccaaacgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 catgctgtactgcatccctgtgatagctagtgttctagctggagatgtctcccaaacgtg 505
Query: 481 aagatctctcccaaatgtcttgggagtgtgagaagcaatcacagcactgcaatctgctca 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 504 aagatctctcccaaatgtcttgggagtgtgagaagcaatcacagcactgcgatctgctca 445
Query: 541 agcagaaactgtctttatatttgcaagaactcttgagtactaactgccatgttgga 596
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 444 agcagaaactgtctttatacttgcaagaactcttgagtactaactgccatgttgga 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
