Query= MSMg01no516_b06.b1 MSMg01no516_b06.b1 CHROMAT_FILE:
MSMg01no516_b06.b1 PHD_FILE: MSMg01no516_b06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:39 2005
(639 letters)
>mm_chr2_77463051_77464089
Length = 1039
Score = 1214 bits (628), Expect = 0.0
Identities = 634/636 (99%), Gaps = 1/636 (0%)
Strand = Plus / Plus
Query: 5 gaattccatctttagtgttagtaaactaattcaccttacatgagctatggcactggctgc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccatctttagtgttagtaaactaattcaccttacatgagctatggcactggctgc 263
Query: 65 tgaggcccaaaccaacaggcaaggcagcatttgaaaccacacatgtaaggtttttgaatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgaggcccaaaccaacaggcaaggcagcatttgaaaccacacatgtaaggtttttgaatt 323
Query: 125 ttttttt-ggccaattaactattcactactaattactactattatcgctatcatgccgtc 183
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttttttttggccaattaactattcactactaattactactattatcgctatcatgccgtc 383
Query: 184 catttcttcttctctctgggggaagggccatatgtgaaggctcagagagaagacatcagg 243
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctttcttcttctctctgggggaagggccatatgtgaaggctcagagagaagacatcagg 443
Query: 244 cgtgctactcctgcattctctgcttattcttacatggcagttcgtcacctagcccagtgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cgtgctactcctgcattctctgcttattcttacatggcagttcgtcacctagcccagtgc 503
Query: 304 tcacaatcagctggctgagtggtcactgagctccgggtctctgtggcaacacttccctct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcacaatcagctggctgagtggtcactgagctccgggtctctgtggcaacacttccctct 563
Query: 364 tctcgaggctggggttccaggcactcactgccatgcttagcttttaacaggggtctgggg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tctcgaggctggggttccaggcactcactgccatgcttagcttttaacaggggtctgggg 623
Query: 424 tttgaaaccatgtcctcatgattagaagcaagtgctcttaaccagtgagaccacctcccc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tttgaaaccatgtcctcatgattagaagcaagtgctcttaaccagtgagaccacctcccc 683
Query: 484 agcccccaccattacctacccatgaaaataacgagttgtcctattggcacagtttcttaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agcccccaccattacctacccatgaaaataacgagttgtcctattggcacagtttcttaa 743
Query: 544 ctccagaaactaactttccacatttttctgtgtggtatattattaatcaccatgtttgtg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctccagaaactaactttccacatttttctgtgtggtatattattaatcaccatgtttgtg 803
Query: 604 atttttatgggaaaaatatgcttatcacttacctag 639
||||||||||||||||||||||||||||||||||||
Sbjct: 804 atttttatgggaaaaatatgcttatcacttacctag 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_b06.g1 MSMg01no516_b06.g1 CHROMAT_FILE:
MSMg01no516_b06.g1 PHD_FILE: MSMg01no516_b06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:39 2005
(632 letters)
>mm_chr2_77632057_77633090
Length = 1034
Score = 1100 bits (569), Expect = 0.0
Identities = 579/583 (99%), Gaps = 2/583 (0%)
Strand = Plus / Minus
Query: 1 ttagaagctcaggaaaataagcttcttaaagttgcatatcccagggtcttacaggggtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ttagaagctcaggaaaataagcttcttaaagttgcatatcccagggtcttacaggggtat 524
Query: 61 ttggcaagaagccttcctttttcacagaatcctccaagagcagtttctgcctagtttgga 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 523 ttggcaagaagccttcctttttcacagaatcctccaagaacagtttctgcctagtttgga 464
Query: 121 aattatggtctgcaggataaatgtaacctttatcaactcattgtcaggaagaggaggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aattatggtctgcaggataaatgtaacctttatcaactcattgtcaggaagaggaggaaa 404
Query: 181 cactctcaagttattgaaagtcagattcaatagtgctgggtgaatgatgggttacggcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cactctcaagttattgaaagtcagattcaatagtgctgggtgaatgatgggttacggcag 344
Query: 241 caagaaatcaagagaaatcaatgggacagtatagaaacctcaaaattggaggagaaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 caagaaatcaagagaaatcaatgggacagtatagaaacctcaaaattggaggagaaaatt 284
Query: 301 tcatatccctccttctatatcacaaagtatagggcaccagggattgaaacagtgaaagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tcatatccctccttctatatcacaaagtatagggcaccagggattgaaacagtgaaagcc 224
Query: 361 ac--agtgttgctactgagtttctctctctcctgggttattgcaacgactttctaaatgg 418
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 acagagtgttgctactgagtttctctctctcctgggttattgcaacgactttctaaatgg 164
Query: 419 tctcccgttttcactctttacttcatcagctgatctcagctctgcagtgttaccaaaaat 478
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 163 tctcccgttttcactctttacttcatcagccgatctcagctctgcagtgttaccaaaaat 104
Query: 479 atgtttctaaaggaaaactcgatcatgagattgctctgatcaaacagctcagatggttca 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atgtttctaaaggaaaactcgatcatgagattgctctgatcaaacagctcagatggttca 44
Query: 539 agttttcccacagacaatccagactcttttgcagagggctcag 581
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 agttttcccacagacaatccagactcttttgcagagggctcag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1034
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1024
Effective search space: 636928
Effective search space used: 636928
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
