NNNCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAGTAGGAATTCAGCAAGGAAGTTACCTATTCCGTAACTAATT
AAGCATTACAAAAGACAGAGCCAACAGCTCAGGGCTAGTCTGCAAAATGT
TTACTAGTACAGTAAGGATAGTCTTAACCAAATAAGGGGGGCTGGCGAGA
TGGCTCAGTGGTTAAAAGTGCCGACTGCTCTTCCGAAGGTCCTGAGTTCA
AAGCACATGGTGGCTCACAACCATCCATAATGAAATCTGATGCCCTCTTC
TGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAAATAA
ATCTTTAAAAAAAAAAAAGGGTTTACCATGAGAAAAGTTAGGGAATCCCA
CTGAGACAGGTTTCTTCACCAGGCCCTAAGAATTCAGGCAGAACTATAGA
GCATAAATAAATTTTATGCCTCAGTCCAGCCTTTCTTTTTATATTTAATA
ACAGGGAGGATGTGTAACCTCCCCCACAGCCTGAAGCAGGCTGAGCCAGG
CTTGACTTGTTGTCACTAGGAGATCACCTGGGGTGAAGCCTGCCTCCCTG
GATCACTCTATTGTTCTGCCACTGCTGCTGCTGCTACCTGCTGCCTAGAT
GTTCTGGAACCTACACGTGGTCACCTGCAGCTGGACTCCAAGGATGAATT
GGTGGAAATCTCCCCCTTCTTTATAGACGTGTTCCCCCACATT

NNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTGGTTAGCAGCACAGGGCAGTGT
TTCCATGGAGTACACAAGGAATCCCAGAAGGCACTCCAAGCTTTGACACA
CCATGGTCACCTGGATTACTGTCCTTTCTTACAGTTACCAGAAGAAGTTC
ATTTATTCCTTCCTTACACCCTCTCATTCTGAGGTGGTGCCTTCTAAGCA
TCTGGGTTCAAGCTATCTTTCTGCCTCAGCCTCCCTAGTTTCTGAGATTA
TAGTTTTTTGTTAACACTAAGTATGTCTTCCTTACATACTTTGTCTTGCA
ATATACTCCTTCCAGGAATTTAAACTGATAGGCCTAAGTCAATCAGTTAT
ATTTTACCAGAAAGCAGTATGAAATAAGCATGTAATCCAGTTTTAACACA
TCTGATACAAAGAGAAATTACCTTGAACCTGTGTGAAATGTGTTTTCATA
TAAGAAATCAGGGGAAAGCCCCATTTATTTCTGGTGTCACTCTCAAGATC
TTTTTTCTGAAGATCTATAGTGATCTATGAGTCTATATACCTATATGCAC
ATATATACTATATATGTGTGTGTATACATACATACATACATACATACATA
CATACATACATACACACACACATAAAGACTCACATATTAAACTGCTACAC
CAATCATTTCTAACTTGANGGGAAAGGCAGACNAAATAGCAAGTAAAAAT
ACAGA

Query= MSMg01no516_e12.g1 MSMg01no516_e12.g1 CHROMAT_FILE:
MSMg01no516_e12.g1 PHD_FILE: MSMg01no516_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:57 2005
         (555 letters)



>mm_chr2_66968976_66969930
          Length = 955

 Score =  996 bits (515), Expect = 0.0
 Identities = 545/555 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   actggttagcagcacagggcagtgtttccatggagtacacaaggaatcccagaaggcact 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 actggttagcagcacagggcagtgcttccatggagtacacaaggaatcccagaaggcact 260

                                                                       
Query: 61  ccaagctttgacacaccatggtcacctggattactgtcctttcttacagttaccagaaga 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 261 ccaagttttgacacaccatggtcacctggattactgtcctttcttacagttgctagaaga 320

                                                                       
Query: 121 agttcatttattccttccttacaccctctcattctgaggtggtgccttctaagcatctgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttcatttattccttccttacaccctctcattctgaggtggtgccttctaagcatctgg 380

                                                                       
Query: 181 gttcaagctatctttctgcctcagcctccctagtttctgagattatagttttttgttaac 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 gttcaagctatctttctgcctcagcctccctagtttctgagattatagttttttgttacc 440

                                                                       
Query: 241 actaagtatgtcttccttacatactttgtcttgcaatatactccttccaggaatttaaac 300
           ||||||  |||||||||||| |||||||| ||| ||||||||||||||||||||||||||
Sbjct: 441 actaagcgtgtcttccttacgtactttgttttgaaatatactccttccaggaatttaaac 500

                                                                       
Query: 301 tgataggcctaagtcaatcagttatattttaccagaaagcagtatgaaataagcatgtaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgataggcctaagtcaatcagttatattttaccagaaagcagtatgaaataagcatgtaa 560

                                                                       
Query: 361 tccagttttaacacatctgatacaaagagaaattaccttgaacctgtgtgaaatgtgttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccagttttaacacatctgatacaaagagaaattaccttgaacctgtgtgaaatgtgttt 620

                                                                       
Query: 421 tcatataagaaatcaggggaaagccccatttatttctggtgtcactctcaagatcttttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatataagaaatcaggggaaagccccatttatttctggtgtcactctcaagatcttttt 680

                                                                       
Query: 481 tctgaagatctatagtgatctatgagtctatatacctatatgcacatatatactatatat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctgaagatctatagtgatctatgagtctatatacctatatgcacatatatactatatat 740

                          
Query: 541 gtgtgtgtatacata 555
           |||||||||||||||
Sbjct: 741 gtgtgtgtatacata 755


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space:   515025
Effective search space used:   515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)