GGGCGCTAAACGACTCACTATTTCGAGAGGATCCGCGGAATTCCTGATCT
TTCTATGACTTTTACCATGAAGGGGTTTTGTATTTTGTCAAATGCTTTCT
CAGCCTCTAATATGATGATCATGTGTTTTTTTTTCCTTTGAGTGTGTTTA
TATCATGGATTACTTTGATGGATTTCCTTATATTGAACCATCCCTGCATT
CCTGGAATAAAGCCTACTTGATCATGATGGATAATTGTTTTAATCTATTC
TTGGATTTTGTTTATGAGAATTTTATTATTTTTCATCAATATTCATAAGT
GAGATTGGTCTGAAGTTCTCTTGCTTTGTTGAGTCTTTGTGTAGTTTAGG
TATAAGTGTAATTGTGGCTTCATAGAACGAATTGGGTAGTGTTCCTTCTG
TTTCTATTTTGTCAAGTAGTTTGAAGAGAGTAGGTACTAGGTCTTCTTTG
AAGGTATGATAAAATTTGTCCTAAAACCATCTTGTCCTGGCCTTGTTCTG
ACTAGGAGACTTTTAATGACTGCTGCTATTTCTTTAGGGCTTATGGGACT
GTTTAGATGGTCTATCTGAACCTGATTTAATTTTAGTACTTGGTATCTGT
CTAGAAAATTTTCCATTTCATCCAGATTTTCCAATTTTNGTTAATATAGG
CTTTTGTAGTAGGATGTAATTATTTTTTGAATTACCTCACTTTCTATTGT
TATGACTCCCCTTTTAGNTCTCACTTCCCTTATTTGGATACTGTCTCTGT
GCCCTCTGTTTAGTCTGGTTAAAGGTTTATTTATCTTGCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCAGGGTGACAAAGAGATACCCAGATGAAGGGAAAGAACAA
AATAAAAGGAAAAGAAGAACCTACATCATTGCCAAGCTTAACTGGAACCC
AGAAGGCATGTTAGTGAAGCTTTCCACAAACTCACTTTGTACACCCACTT
TGGATTGTAAACCTCAACATTTTTTTTTCAAAAAAATAAAAATCTACCTT
GAAATTCTGTCTTGTATAAATGACACAAGCCCTTCAGAGTTCTTTTCCCA
GATTTGGAAGCTGGCTTATGGCTGCTGTCAAGATGGAACTGAGTTGTTTC
TTATTGGATCCTATATATTTCTCACAGATAACACAGGGCTTCCAACTCCC
TAGCTGTGAATCTCTATCTTTCATCTGAATCAAATTTACAGTGATGAGGA
AGAGAGAAAAAGGAATTTAATTCTCAATGGGACCCCATACAGTGCTGTAA
AACATGATTTCTGCTTTATACCAAGTAAGAAGTAATAACATAGGAACAAT
GAAAATTGGCAATAAAATTGTGAAAATGGTGGAAGGAAGACTTGGCAAAA
TTAATCGGAGTATCATGGGTATATGCTATAGTAACTTTCATCATAGAATC
AAAAAGCACTCACTTACCTTCTTCGAAGAAATTCTTAGAGCTTATTTTGT
CTGTGTACAGAATTCCATCCCGGTATGAGCATCTGCCAGACCTTGAAGAT
AAACATTTATAATATGGTTTAAATAN

Query= MSMg01no517_e24.g1 MSMg01no517_e24.g1 CHROMAT_FILE:
MSMg01no517_e24.g1 PHD_FILE: MSMg01no517_e24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:21 2005
         (614 letters)



>mm_chr2_39946142_39947156
          Length = 1015

 Score = 1112 bits (575), Expect = 0.0
 Identities = 605/615 (98%), Gaps = 1/615 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagggtgacaaagagatacccagatgaagggaaagaacaaaataaaaggaaaagaagaac 60
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 815 cagggtgacaaagagatacccagatgaagggaaagagcaaaataaaaggaaaagaagaac 756

                                                                       
Query: 61  ctacatcattgccaagcttaactggaacccagaaggcatgttagtgaagctttccacaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ctacatcattgccaagcttaactggaacccagaaggcatgttagtgaagctttccacaaa 696

                                                                       
Query: 121 ctcactttgtacacccactttggattgtaaacctcaacat-ttttttttcaaaaaaataa 179
            |||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 695 ttcactttgtatacccactttggattgtaaaccccaacatgttttttttcaaaaaaataa 636

                                                                       
Query: 180 aaatctaccttgaaattctgtcttgtataaatgacacaagcccttcagagttcttttccc 239
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 635 aaatctaccttgaaattctgtcttgtataaatgacacgagcccttcagagttcttttccc 576

                                                                       
Query: 240 agatttggaagctggcttatggctgctgtcaagatggaactgagttgtttcttattggat 299
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 agatttggaagctggcatatggctgctgtcaagatggaactgagttgtttcttattggat 516

                                                                       
Query: 300 cctatatatttctcacagataacacagggcttccaactccctagctgtgaatctctatct 359
           |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 515 cctatatatttctcacagataacacagggcttccaattccctggctgtgaatctctatct 456

                                                                       
Query: 360 ttcatctgaatcaaatttacagtgatgaggaagagagaaaaaggaatttaattctcaatg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ttcatctgaatcaaatttacagtgatgaggaagagagaaaaaggaatttaattctcaatg 396

                                                                       
Query: 420 ggaccccatacagtgctgtaaaacatgatttctgctttataccaagtaagaagtaataac 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ggaccccatacagtgctgtaaaacatgatttctgctttataccaagtaagaagtaataac 336

                                                                       
Query: 480 ataggaacaatgaaaattggcaataaaattgtgaaaatggtggaaggaagacttggcaaa 539
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 335 ataggaacaatgaaaattggcaataaaattgtgaaaatggtggaaggaaggcttggcaaa 276

                                                                       
Query: 540 attaatcggagtatcatgggtatatgctatagtaactttcatcatagaatcaaaaagcac 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 attaatcggagtatcatgggtatatgctatagtaactttcatcatagaatcaaaaagcac 216

                          
Query: 600 tcacttaccttcttc 614
           |||||||||||||||
Sbjct: 215 tcacttaccttcttc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1015
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1005
Effective search space:   607020
Effective search space used:   607020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)