Query= MSMg01no517_g08.b1 MSMg01no517_g08.b1 CHROMAT_FILE:
MSMg01no517_g08.b1 PHD_FILE: MSMg01no517_g08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:28 2005
(643 letters)
>mm_chr2_39525659_39526703
Length = 1045
Score = 1191 bits (616), Expect = 0.0
Identities = 639/650 (98%), Gaps = 7/650 (1%)
Strand = Plus / Plus
Query: 1 aagaaaagaaaaagaagaaa-----agaaaagaaaaacctgaaagctctctctgtgcagc 55
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 196 aagaaaagaaaaagaagaaaagaagagaaaagaaaaacctgaaagctctctctgtgcagc 255
Query: 56 ttcagaacagcaatgcagcttgcacctacctcattgcccgagactgattttgccctgatc 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ttcagaacagcaatgcagcttgcacctacctcattgcccgagactgattttgccctgatc 315
Query: 116 cagtcctcccattcttgaaccctgaacagctgaggctggtcctcagcaattaaatactta 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cagtcctcccattcttgaaccctgaacagctgaggctggtcctcagcaattaaatactta 375
Query: 176 taacttgtgggtacagtggcttgtaggagtgagataggtgaaaaataagcaacactttaa 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 taacttgtgggtacagtggcttgtaggagtgagataggtgaaaaataagcaacactttaa 435
Query: 236 acattacataaaccatggttacatgttaaggctttgttgtctctctctttagatttgttt 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 acattacataaaccatggttacatgttaaggctttgttgtctctctctttagatttgttt 495
Query: 296 ttactactctttgaaaagagaatgagaataacctctggctcgggatgctcagcattcgaa 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ttactactctttgaaaagagaatgagaataacctctggctcgggatgctcagcattcgaa 555
Query: 356 gaccgtcaattgatacctatttttgagaactaaaacccggaacaaaagtatgcctttgcc 415
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 556 gaccgtcaattgatacctatttttgagaactgaaaccctgaacaaaagtatgcctttgcc 615
Query: 416 tgcataaaatcttatcacctttc--cccccaagcagttctagaaaaatccatggtcagag 473
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 616 tgcataaaatcttatcacctttctccccccaagcagttctagaaaaatccatggtcagag 675
Query: 474 ggctaaacatcaagaaaggttgaaagtcactttctaaaaatatcttgaaactgccaatca 533
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 676 ggctaaacatcaagaaaggttgaaagtcactttctaaaaatatcttggaactgccaatca 735
Query: 534 agatgtaggctaaaaccctttctataaagcaccaactaataatagtctatggaattttag 593
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 agatgtgggctaaaaccctttctataaagcaccaactaataatagtctatggaattttag 795
Query: 594 tggcgatttctaacatttaccatatataacctacacagcacacccttggg 643
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tggcgatttctaacatttaccatatataacctacacagcacacccttggg 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1045
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1035
Effective search space: 655155
Effective search space used: 655155
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_g08.g1 MSMg01no517_g08.g1 CHROMAT_FILE:
MSMg01no517_g08.g1 PHD_FILE: MSMg01no517_g08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:28 2005
(610 letters)
>mm_chr2_39588629_39589638
Length = 1010
Score = 1156 bits (598), Expect = 0.0
Identities = 604/606 (99%)
Strand = Plus / Minus
Query: 1 tttctgcctcccagatatctcaccttctgcttcctgcctaagtcataggccatcaaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 tttctgcctcccagatatctcaccttctgcttcctgcctaagtcataggccatcaaatgt 846
Query: 61 attattgacagttgccacattcatatagacataagatatattgttacataacagcatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 attattgacagttgccacattcatatagacataagatatattgttacataacagcatgat 786
Query: 121 gcctcctggtatacatcagcttttcacatgaggaagtatgtctaagaatatgtcaaactc 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 785 gcctcctggtatacatcagcttctcacatgaggaagtatgtctaagaatatgtcaaactc 726
Query: 181 tgaaggtgcaattttattttaaaaggaattttaatgcatttttttacccagaaatacagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tgaaggtgcaattttattttaaaaggaattttaatgcatttttttacccagaaatacagt 666
Query: 241 atactgagatgggcaaactacagccctttccttgctatgtatacatcattaatgtcaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 atactgagatgggcaaactacagccctttccttgctatgtatacatcattaatgtcaact 606
Query: 301 gtttaaaaatagatgcctctgaggtaatttgctgtgtgttttatggttgagaagtgttaa 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gtttaaaaatagatacctctgaggtaatttgctgtgtgttttatggttgagaagtgttaa 546
Query: 361 atatagatataagtcagagtatgatttctacatgacagtaaatgcagcctatgacactaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atatagatataagtcagagtatgatttctacatgacagtaaatgcagcctatgacactaa 486
Query: 421 ctgggaaagaataacaaatgaaagttgccttagattgtactcactaggctttttctttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ctgggaaagaataacaaatgaaagttgccttagattgtactcactaggctttttctttta 426
Query: 481 attaggttacagttcaagatagtctgactaggttgtgataccctagagctaatccaaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 attaggttacagttcaagatagtctgactaggttgtgataccctagagctaatccaaaga 366
Query: 541 tttccatgtttgatggacagttaatattcattctctctattatttgtatggatgagtggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tttccatgtttgatggacagttaatattcattctctctattatttgtatggatgagtggt 306
Query: 601 ttgcag 606
||||||
Sbjct: 305 ttgcag 300
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
