Query= MSMg01no518_c12.b1 MSMg01no518_c12.b1 CHROMAT_FILE:
MSMg01no518_c12.b1 PHD_FILE: MSMg01no518_c12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:28 2005
(664 letters)
>mm_chr2_12896583_12897647
Length = 1065
Score = 1210 bits (626), Expect = 0.0
Identities = 655/670 (97%), Gaps = 11/670 (1%)
Strand = Plus / Plus
Query: 5 gaattccagatggagcacaggaaaaaaagggc---------acactgaaaccacaaattc 55
||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 197 gaattccagatggagcacaggaaaaaa-gggcttcctagccacactgaaaccacaaattc 255
Query: 56 cagatctttgtcttgctccattcaaagatatattctcccttaaaagggtgctggctgctt 115
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 256 cagatctttgtcttgctccattcaaagatacattctcccttgaaagggtgctggctgctt 315
Query: 116 tttgttccttaatcttttcttatgctctaagtgtgtgttacatcgtatgtgatcacagaa 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tttgttccttaatcttttcttatgctctaagtgtgtgttacatcgtatgtgatcacagaa 375
Query: 176 gagccagccaactgtgtctgagagcattagaggagtgtcccaggagggatgacatttctt 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gagccagccaactgtgtctgagagcattagaggagtgtcccaggagggatgacatttctt 435
Query: 236 aaataattttttttt-acaaaggctcacagcttgtaaggataaaacataccatgttgctc 294
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aaataattttttttttacaaaggctcacagcttgtaaggataaaacataccatgttgctc 495
Query: 295 tttcaaatacacatcaattaagtgtgtactttgttacttttctggcagacttggtggtag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tttcaaatacacatcaattaagtgtgtactttgttacttttctggcagacttggtggtag 555
Query: 355 tgttttatcaattcatcctaatttctgcccccatctgtggctttccagaacacatctgta 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tgttttatcaattcatcctaatttctgcccccatctgtggctttccagaacacatctgta 615
Query: 415 atgctgaagggagaaaacagaaaattaacccaccaagagggttgaatctattattaatgg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 atgctgaagggagaaaacagaaaattaacccaccaagagggttgaatctattattaatgg 675
Query: 475 tgttgtgatctcctctaccaaaggagtaatcacatactgattattttgagtagaaaagaa 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tgttgtgatctcctctaccaaaggagtaatcacatactgattattttgagtagaaaagaa 735
Query: 535 taaagctttgaacagtacattccagtctatggctataccacctccaatgcacttcgtctt 594
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 736 taaagctttgaacagtacattccagtctatggctataccacctccaatgcactttgtctt 795
Query: 595 ttctgaacagtgaggtcatcagtaaaaaatatactgcctgggcagggactggcaattgta 654
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 796 ttctgaacagtgaggtcatcagtaaaaaatatactgcctgggcagggactggcacttgta 855
Query: 655 tggtaattct 664
||||||||||
Sbjct: 856 tggtaattct 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1065
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1055
Effective search space: 689970
Effective search space used: 689970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_c12.g1 MSMg01no518_c12.g1 CHROMAT_FILE:
MSMg01no518_c12.g1 PHD_FILE: MSMg01no518_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:29 2005
(648 letters)
>mm_chr2_13022907_13023954
Length = 1048
Score = 1214 bits (628), Expect = 0.0
Identities = 643/648 (99%)
Strand = Plus / Minus
Query: 1 tttgtgcctgtaccctctgtctcagaggtggagaggatttcctgccaaccaacaagagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 tttgtgcctgtaccctctgtctcagaggtggagaggatttcctgccaaccaacaagagca 735
Query: 61 aaagccccaatgccatcttgcatgcagtcttgtctgtaatgggtttaagttgctacccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 aaagccccaatgccatcttgcatgcagtcttgtctgtaatgggtttaagttgctacccat 675
Query: 121 ccctccccattcacttcctggcttcctagcagcatgtgccagcactgtgtggccaaaggt 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 674 ccctccccattcacttcctggcttcctagcagcacgtgccagcactgtgtggccaaaggt 615
Query: 181 gtgcctgggcacagactgaagagttgcagttcacttgcttgaagccacctgataaataga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gtgcctgggcacagactgaagagttgcagttcacttgcttgaagccacctgataaataga 555
Query: 241 ggatgctagaaaagacagattgaggaatcatgtgagatcagatactgctgtcatctatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ggatgctagaaaagacagattgaggaatcatgtgagatcagatactgctgtcatctatct 495
Query: 301 tttgggttaatgagagtcaggagtggggaggagaaaaccagttggagatgccttgaacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tttgggttaatgagagtcaggagtggggaggagaaaaccagttggagatgccttgaacca 435
Query: 361 ggtggcagtcagtggttggcatagatgtccagttgcttccagtgccctggggtcacggcc 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ggtggcagtcggtggttggcatagatgtccagttgcttccagtgccctggggtcacggcc 375
Query: 421 cacctagaaaggatgcctgctcactgcctgtgaatagctttttctgaagatacagaaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cacctagaaaggatgcctgctcactgcctgtgaatagctttttctgaagatacagaaaga 315
Query: 481 atctgaacatagaaaggcaggcatagcccatgaagccctggggttatgaagttagtggtt 540
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 314 atctgaacatagaaaggcaggcgtagcccatgaagtcctggggttatgaagttagtggtt 255
Query: 541 gattaggccattccattacagacccttgagagtgtccccaacccccaccttattgttatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gattaggccattccattacagacccttgagagtgtccccaacccccaccttattgttatc 195
Query: 601 ttgcttctgcttgcatacccccaggaacatgagacttactattttagc 648
|||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 194 ttgcttctgcttgcatacccccaggaacatgaaacttactattttagc 147
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
