Query= MSMg01no518_g05.b1 MSMg01no518_g05.b1 CHROMAT_FILE:
MSMg01no518_g05.b1 PHD_FILE: MSMg01no518_g05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:46 2005
(229 letters)
>mm_chr2_69425954_69426582
Length = 629
Score = 366 bits (189), Expect = e-106
Identities = 210/223 (94%), Gaps = 10/223 (4%)
Strand = Plus / Minus
Query: 7 ggaattccggtaatttcgcaacactagagcacaaaggcagcaacaatgagaagaaccctt 66
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ggaattccggtaagttggcaacactagagcacaaaggcagcaacaatgagaagaaccctt 251
Query: 67 cagtgccgaaaggaatgcttggatccctggaccgccactgtggagcgcgcgcgcgcgcgc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 cagtgccgaaaggaatgcttggatccctggaccgccactgtggagcgcgcgcgcgcgcgc 191
Query: 127 gcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacaa 186
||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gcg----------cgcacacacacacacacacacacacacacacacacacacacacacaa 141
Query: 187 cttgcctcccaggcacaggtcgaggatctctgcaacttggcgg 229
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 cttgcctcccaggcacaggtcgaggatctctgcaacttggcgg 98
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 24
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no518_g05.g1 MSMg01no518_g05.g1 CHROMAT_FILE:
MSMg01no518_g05.g1 PHD_FILE: MSMg01no518_g05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:46 2005
(647 letters)
>mm_chr2_69298998_69300044
Length = 1047
Score = 1228 bits (635), Expect = 0.0
Identities = 644/647 (99%)
Strand = Plus / Plus
Query: 1 atctcaaaaaaaaaaaaacagaaaagaaaatctctgtccaactctctagagtctcgaagg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctcaaaaaaaaaaaatcagaaaagaaaatctctgtccaactctctagagtctcgaagg 260
Query: 61 tcaatgtatgcccaagggcaggcaaggcaatttgaaaaggggagcgggagcctcactttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaatgtatgcccaagggcaggcaaggcaatttgaaaaggggagcgggagcctcactttt 320
Query: 121 cattgttgccacacaggaactgcgtgctggagcacatgggcatacagagtgtcctgtctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattgttgccacacaggaactgcgtgctggagcacatgggcatacagagtgtcctgtctc 380
Query: 181 gaagctgaacggtctggaagtcatcgggacactcgcaggtgaatcctctccctcctgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagctgaacggtctggaagtcatcgggacactcgcaggtgaatcctctccctcctgctt 440
Query: 241 tgatgaggcacaggtgagaacagccaccgttgttggtagcacagggattgctcactatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgatgaggcacaggtgagaacagccaccgttgttggtagcacagggattgctcactatgg 500
Query: 301 aatagaagaagaaagcacgcatttgttgtcatttgccttgagtgtcaaatgccaattagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatagaagaagaaagcacgcatttgttgtcatttgccttgagtgtcaaatgccaattagc 560
Query: 361 agcataccaacttaactaagagaatgctgtcagttttatcattatgccaacatttaaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcataccaacttaactaagagaatgctgtcagttttatcattatgccaacatttaaata 620
Query: 421 atgcagatagtggttttgatgtttctccaagtccagggaaagtaaagtataatactgctt 480
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 621 atgcagatagtggttttgatgtttctccaagtccagggaaaataaagtataatactgctt 680
Query: 481 gcattctattccagattttaaatatgagttgtgattcccagcagacactcatacatcaag 540
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcattctatcccagattttaaatatgagttgtgattcccagcagacactcatacatcaag 740
Query: 541 tctcctgcatcctaaggattgattggaacaacaaaagtttgcatgccagagccatgcatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctcctgcatcctaaggattgattggaacaacaaaagtttgcatgccagagccatgcatg 800
Query: 601 aatagcctgtgcatgtgcagtgtcttaagttttttggtcttccctta 647
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aatagcctgtgcatgtgcagtgtcttaagttttttggtcttccctta 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
