NACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTGTGATTCTACTAATGATTGCTATGGTAAAATATGCTCATGTG
TGCAATAGTGGCATGAAGTTATATAGGTAACCAATCACTTTCTCATTGGA
TTTAAGACCTGCTCCATAAGTAGAAACTCATACTAGTAGTCTAAATCTGT
CATGACCCATATTTGTTGAATTCTGAGGTCCTAGGAGTGAATCTACTATT
ATAACTTTACTAAACAGACATAGCATCAAACTGATGTCTACATATATTTC
TGTACTCATAGATTAGTACAGTACTAATCAGGAAAGTATTTTCACAATGG
ACAGCAATCAATAAAGAGACTCCAAGTGATCAAAGAAAACAAGTGCTTTT
GGAGTATGTAAACATGAATGGGGGCATCTGTACCACTCTCTTTCATCCCA
ATACTTATAAAGCATCATGGAAGATAGGGAAAAATGACTGTAAGAGCCAG
AGGTTGGCAAGCACTGGGGCTAAAAAGGACCTTCTGGACATGTCAGGACA
GTTGTCCTCATGAACTCACAGTGGCTATGGTTACTGGCTCAAGACCTATA
CAAGAACACCACTGTGGCCATCTGCAGCCACATGAACTGGGTCCTCCTGA
AAGGCAGGCTGGGGCTAATAGAGAATAAATGGTGAGAAAAAGATGAGGCC
TAGACAAATACTGATCAAAGTCCATAGTTTACTAAAAATCTGTGCTTATA
TAGGGG

TCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGACTACAGAGAGATAATTG
TACTTTGCACCAAGAAAATAATATAAACTATATAATTAGAGAATATTTGA
GTAATAATCACTTAATCAAGTATGGGGGTCAATTTCAAAATAGATTTTAA
AATTTGAAATTTGGGAGAATTTGAGCCTCTTTGAATTTGAGAGCATCATG
ATACGTGTTCTTCTATTCTGTACTATATTCTAATTTTAACGTTTTTCTGA
GTTCTTTTTCATGATCCCTAAAATACAAATATTGTTCAAGAATCGAGTAT
AGACAGTACAGAGTCTCAATCATAATAAGCAGACTTCATCCTCTCATGAG
GAAAGTCATTCAGGACCATTACTCTTGTTGGTGTGCTACTGATCAGAGGA
GACTAGTACATAGACTAAAGCCACAAAACTGTCCTTTCTAGATTCCTTCC
AGAGAATTCTGCAGACTGATATGATTGGGGCTTCTGTCCTAAAATGGCAG
GACCTAAAGATGATAGCAAGATGCTAAGGACAAAGCACTTAGGCAAAGAC
ATGAATATACAGACAGGGTAGGAAAATCAGGACAATTAACCATAACAGCA
CAGATGTCAGTCTGAAAGCTTTACGTAATGTTTCTTTTATACCCTTTCCA
ACTCTCTTCTCAAAGGATCTCTGAGCCTTGGAAAGGGTGGTCTGGTATCT
GTGTTGTCTTTGG

Query= MSMg01no518_n01.g1 MSMg01no518_n01.g1 CHROMAT_FILE:
MSMg01no518_n01.g1 PHD_FILE: MSMg01no518_n01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:20 2005
         (685 letters)



>mm_chr2_138493215_138494310
          Length = 1096

 Score = 1234 bits (638), Expect = 0.0
 Identities = 677/696 (97%), Gaps = 11/696 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcagactacagagagataattgtactttgcaccaagaaaataatataaactatataatta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 tcagactacagagagataattgtactttgcaccaagaaaataatataaactatataatta 757

                                                                       
Query: 61  gagaatatttgagtaataatcacttaatcaagtatgggggtcaatttcaaaatagatttt 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 756 gagaatatttgagtaataatcacttaatcaagtatgagggtcaatttcaaaatagatttt 697

                                                                       
Query: 121 aaaatttgaaatttgggagaatttgagcctctttgaatttgagagcatcatgatacgtgt 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 696 aaaatttgaaatttgggagaatttgagcctctttgaatttgagagcatcatgatacatgt 637

                                                                       
Query: 181 tcttctattctgtactatattctaattttaacgtttttctgagttctttttcatgatccc 240
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 636 tcttctattctgtactatattctaattttaacatttttctgagttctttttcatgatccc 577

                                                                       
Query: 241 taaaat-------acaaatattgttcaagaatcgagtatagacagtacagagtctcaatc 293
           ||||||       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 taaaatacaaataacaaatattgttcaagaatcgagtatagacagtacagagtctcaatc 517

                                                                       
Query: 294 ataataagcagacttcatcctctcatgaggaaagtcattcaggaccattactcttgttgg 353
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ataataagcagacttcatcctctcatgaggaaagtcattcaggaccattactcttgttgg 457

                                                                       
Query: 354 tgtgctactgatcagaggagactagtacatagactaaagccacaaaactgtcctttctag 413
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tatgctactgatcagaggagactagtacatagactaaagccacaaaactgtcctttctag 397

                                                                       
Query: 414 attccttccagagaattctgcagactgatatgattggggcttctgtcctaaaatggcagg 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 attccttccagagaattctgcagactgatatgattggggcttctgtcctaaaatggcagg 337

                                                                       
Query: 474 acctaaagatgatagca----agatgctaaggacaaagcacttaggcaaagacatgaata 529
           |||||||||||||||||    |||||||||||||||||||||||||||||||||||| ||
Sbjct: 336 acctaaagatgatagcaagatagatgctaaggacaaagcacttaggcaaagacatgagta 277

                                                                       
Query: 530 tacagacagggtaggaaaatcaggacaattaaccataacagcacagatgtcagtctgaaa 589
           |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 276 tacagacagggtaggaaaatcaggacaattaaccataatagcacagatatcagtctgaaa 217

                                                                       
Query: 590 gctttacgtaatgtttcttttataccctttccaactctcttctcaaaggatctctgagcc 649
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gctttatgtaatgtttcttttataccctttccaactctcttctcaaaggatctctgagcc 157

                                               
Query: 650 ttggaaagggtggtctggtatctgtgttgtctttgg 685
           ||||||||||||||||||||||||||||||||||||
Sbjct: 156 ttggaaagggtggtctggtatctgtgttgtctttgg 121


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1096
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1086
Effective search space:   733050
Effective search space used:   733050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)