Query= MSMg01no518_p23.b1 MSMg01no518_p23.b1 CHROMAT_FILE:
MSMg01no518_p23.b1 PHD_FILE: MSMg01no518_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:35 2005
(678 letters)
>mm_chr2_57034305_57035386
Length = 1082
Score = 1007 bits (521), Expect = 0.0
Identities = 542/551 (98%), Gaps = 4/551 (0%)
Strand = Plus / Minus
Query: 5 gaattctcgcctgttacgcgggaggcccgggttcgattcccggccaatgcacttgccttt 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gaattctcgcctgccacgcgggaggcccgggttcgattcccggccaatgcacttgccttt 492
Query: 65 ttgtttcaaatcttgtttttctaaaatattaacattaatg----aagaaactacgaattt 120
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 491 ttgtttcaaatcttgtttttctaaaatattaacattaatgaagaaagaaactacgaattt 432
Query: 121 ttcttcctagcatttcgtttcacttgttttcccagcaatcactagagtgagttttccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ttcttcctagcatttcgtttcacttgttttcccagcaatcactagagtgagttttccaca 372
Query: 181 ctgcagatttttcacggcctttttgttttcggttttcgatgttgtagtggtgggcaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctgcagatttttcacggcctttttgttttcggttttcgatgttgtagtggtgggcaaaat 312
Query: 241 gtacaagtgaaaatcttttctttgagagagaatgaaaaacagaattccggctgcttggag 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 311 gtacaagtgaaaatcttttctttgagaaagaatgaaaaacagaattccggctgcttggag 252
Query: 301 atgccggggattgaacccgggacctcacacatgcgaagcgcgcgctctaccactgagcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atgccggggattgaacccgggacctcacacatgcgaagcgcgcgctctaccactgagcta 192
Query: 361 catcccccagccactaactgctctcttcatatgcctacttatacaaagaacccaacgctc 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 catcccccagccgctaactgctctcttcatatgcctacttatacaaagaacccaacgctc 132
Query: 421 ctctaaaccaaggagtcagtctgactttagcagattccacagtgcatttcttttttgtaa 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 131 ctctaaaccaaggagtcagtctgactttagcagattccacagtgcatttcttttttataa 72
Query: 481 tcctttctcaggctctgctcgtggtacatctgaaccgacccggtgcagggagcccgcagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tcctttctcaggctctgctcgtggtacatctgaaccgacccggtgcagggagcccgcagc 12
Query: 541 taaactcagcg 551
|||||||||||
Sbjct: 11 taaactcagcg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1082
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1072
Effective search space: 716096
Effective search space used: 716096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_p23.g1 MSMg01no518_p23.g1 CHROMAT_FILE:
MSMg01no518_p23.g1 PHD_FILE: MSMg01no518_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:35 2005
(674 letters)
>mm_chr2_56913896_56914969
Length = 1074
Score = 1274 bits (659), Expect = 0.0
Identities = 670/674 (99%)
Strand = Plus / Plus
Query: 1 agagaatgaccttaataaccttatggagaagacgaccctaaaacactccattttctattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagaatgaccttaataaccttatggagaagacgaccctaaaacactccattttctattc 260
Query: 61 tatagaagctaacgggctagagaaatttgataactaatatataaatttatactccagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatagaagctaacgggctagagaaatttgataactaatatataaatttatactccagctt 320
Query: 121 cagagctttattgctgcaatgaaaatgggtactggtccatagagccaaaccaaaaggaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagagctttattgctgcaatgaaaatgggtactggtccatagagccaaaccaaaaggaac 380
Query: 181 tccaaatgaagctaatgaaaattacaaggcagatgaagaagaaatcaagcagaagtccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccaaatgaagctaatgaaaattacaaggcagatgaagaagaaatcaagcagaagtccta 440
Query: 241 aaaataaatcaaatactctaaaaaccattcatgaatgccaatgcctgtgaaaaagatcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaataaatcaaatactctaaaaaccattcatgaatgccaatgcctgtgaaaaagatcac 500
Query: 301 catagactttatagaccaattgtgttatatgaggctttcactataaaattcagaatcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 501 catagactttatagaccaattgtgttatatgaggctttcactataaaattcagaatcgaa 560
Query: 361 taactcttgaggctttaaaagaattagagttgatctagccaaaacactgccatattcata 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 561 taactcttgaggctttaaaagaattagagttgatctagccaaaacactgccatatttata 620
Query: 421 agaggaaggctatcaatacacctccaggcttctgcatgaacttgtcaagcgacaggagcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaggaaggctatcaatacacctccaggcttctgcatgaacttgtcaagcgacaggagcc 680
Query: 481 ttactaactaccaaagcaacctaagtccgagaatgagggatgatggcggcagacagaagg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 681 ttactaactaccaaagcaacctaagtccgagaatgagggatgatggcggcaggcagaagg 740
Query: 541 cagaggcaagcaaatctctagggcttaagggctaacctggtttacatagcaagctccagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagaggcaagcaaatctctagggcttaagggctaacctggtttacatagcaagctccagg 800
Query: 601 caaaccaaggctacatagtgagactctatctgaaaatagagaanaagaaaaagaacaaat 660
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 801 caaaccaaggctacatagtgagactctatctgaaaatagagaaaaagaaaaagaacaaat 860
Query: 661 ctaaacctaagcca 674
||||||||||||||
Sbjct: 861 ctaaacctaagcca 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
