Query= MSMg01no519_b17.b1 MSMg01no519_b17.b1 CHROMAT_FILE:
MSMg01no519_b17.b1 PHD_FILE: MSMg01no519_b17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:43 2005
(686 letters)
>mm_chr2_24041377_24042462
Length = 1086
Score = 1224 bits (633), Expect = 0.0
Identities = 647/659 (98%), Gaps = 12/659 (1%)
Strand = Plus / Minus
Query: 28 ataacattatctccctacaagtttcagaccataaatagcatttggcatttaacattcacc 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 ataacattatctccctacaagtttcagaccataaatagcatttggcatttaacattcacc 1027
Query: 88 cagcctccaattccccagaaacccttccccttcactgtcatatcttactgcctaaggcaa 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 cagcctccaattccccagaaacccttccccttcactgtcatatcttactgcctaaggcaa 967
Query: 148 gggaggtcttcatgttgggcagttcagctagaatcctaacaattcagaagtgaaagacag 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 gggaggtcttcatgttgggcagttcagctagaatcctaacaattcagaagtgaaagacag 907
Query: 208 agggttactcacacagagctctcacaggattgctcacaggatcactcacaggatcgctca 267
|||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 906 agggttactcacacagagctctcacaggattgctcacaggatca------------ctca 859
Query: 268 caggatcgctcacaggatcgctcacaggatcgctcacaggatcgctcacaggatcgctca 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 caggatcgctcacaggatcgctcacaggatcgctcacaggatcgctcacaggatcgctca 799
Query: 328 caggatcacttacagcaagacagatctgtccattcactgaaccctgaactgcagaaagct 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 caggatcacttacagcaagacagatctgtccattcactgaaccctgaactgcagaaagct 739
Query: 388 ccacactcagaggcgcactcaaagggttttgtaggtttgtaggtacatggcaagaaagag 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ccacactcagaggcgcactcaaagggttttgtaggtttgtaggtacatggcaagaaagag 679
Query: 448 tccttatggaaagtctagaagaccaaatcccagcttgggcagctcccaggtgtaatgatg 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tccttatggaaagtctagaagaccaaatcccagcttgggcagctcccaggtgtaatgatg 619
Query: 508 gcttccgaaccagtctgggtcctttatctgggtgactaccagaggcaccagcttctttta 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gcttccgaaccagtctgggtcctttatctgggtgactaccagaggcaccagcttctttta 559
Query: 568 tggggtgtggcaaatgtacagcatggaagacatccagttcctcctgccagaactgtgctt 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tggggtgtggcaaatgtacagcatggaagacatccagttcctcctgccagaactgtgctt 499
Query: 628 ctgggaagttcaggtgaagaaatctcagagtcagcatgagtctgcatgacttgtctgag 686
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ctgggaagttcaggtgaagaaatctcagagtcagcatgagtctgcatgacttgtctgag 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space: 727376
Effective search space used: 727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_b17.g1 MSMg01no519_b17.g1 CHROMAT_FILE:
MSMg01no519_b17.g1 PHD_FILE: MSMg01no519_b17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:44 2005
(629 letters)
>mm_chr2_23929213_23930241
Length = 1029
Score = 1216 bits (629), Expect = 0.0
Identities = 629/629 (100%)
Strand = Plus / Plus
Query: 1 tttaaatggggcttaatgggtcatcctagtaggaatatggaagactttgttgctgggagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaaatggggcttaatgggtcatcctagtaggaatatggaagactttgttgctgggagt 260
Query: 61 ggtttgaactgtgttgacctggcccaagagatttcaaaagagaagaacttcaggatgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtttgaactgtgttgacctggcccaagagatttcaaaagagaagaacttcaggatgtgg 320
Query: 121 tataaagactggttttgtggtattttggtgaagaatgtggctactttttacccttgtctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tataaagactggttttgtggtattttggtgaagaatgtggctactttttacccttgtctg 380
Query: 181 aaaagtctgcctgaggctaaggtgaagagacttggattaattgcatttattgcagaagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaagtctgcctgaggctaaggtgaagagacttggattaattgcatttattgcagaagtt 440
Query: 241 ggactggagagatggctcagtggttaagagtaccaacttctgtcttagttaggagctgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggactggagagatggctcagtggttaagagtaccaacttctgtcttagttaggagctgag 500
Query: 301 aattctatgtcttcatccaaaggctgctagtggaagactgacttccaggcaactagggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattctatgtcttcatccaaaggctgctagtggaagactgacttccaggcaactagggtg 560
Query: 361 aggatcttatacccacagtgacacacccattccaaccaggtcacacctattccaacaagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggatcttatacccacagtgacacacccattccaaccaggtcacacctattccaacaagg 620
Query: 421 ccacaccttcagatggtgccactccctggtccaaggatatacaaaccatcatagtctcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccacaccttcagatggtgccactccctggtccaaggatatacaaaccatcatagtctcat 680
Query: 481 agtctaattaacaaccaatattgaaaaccactaccttatagcaacagccccaactaggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtctaattaacaaccaatattgaaaaccactaccttatagcaacagccccaactaggtg 740
Query: 541 accctgctattttaagtagagtttactatcccttttctgttttctatgatgagagcccct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 accctgctattttaagtagagtttactatcccttttctgttttctatgatgagagcccct 800
Query: 601 tttgggatccacattatctctaatcctgg 629
|||||||||||||||||||||||||||||
Sbjct: 801 tttgggatccacattatctctaatcctgg 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
