Query= MSMg01no519_g04.b1 MSMg01no519_g04.b1 CHROMAT_FILE:
MSMg01no519_g04.b1 PHD_FILE: MSMg01no519_g04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:05 2005
(400 letters)
>mm_chr2_140508670_140509470
Length = 801
Score = 723 bits (374), Expect = 0.0
Identities = 389/394 (98%), Gaps = 1/394 (0%)
Strand = Plus / Minus
Query: 5 gaattctatactatctggatggataatcggggtgtcacaaatgacccctgtgacggagat 64
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 598 gaattctctactatctggatggataatctgggtgtcacaaatgacccctgtgacggagat 539
Query: 65 gaaacaaacataaacgtttaagtgatagggttgttgctgtcgttgttttagtgttagggc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gaaacaaacataaacgtttaagtgatagggttgttgctgtcgttgttttagtgttagggc 479
Query: 125 ttgaacccatggcattacagatgcctgacaaacatgctgaatcacatctcagccccagaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ttgaacccatggcattacagatgcctgacaaacatgctgaatcacatctcagccccagaa 419
Query: 185 acatttgttttattaaaacaacgaagcaaacacaaagatcatacactggcagacaacacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 acatttgttttattaaaacaacgaagcaaacacaaagatcatacactggcagacaacacc 359
Query: 245 actggcagaaatacacagagagatcattgttattcagaatatataattacctattaaatt 304
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 358 actggcagaaatacacagagagataattgttattcagaatatataattacctattaaatt 299
Query: 305 ttatcaagaaaaattcaaataacacaggaagcaaaaa-acatatatattgcatttcagca 363
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 298 ttatcaagaaaaattcaaataacacaagaagcaaaaatacatatatattgcatttcagca 239
Query: 364 gaaagacaccaaggatacaacatcatgctcatta 397
||||||||||||||||||||||||||||||||||
Sbjct: 238 gaaagacaccaaggatacaacatcatgctcatta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 801
Length adjustment: 9
Effective length of query: 391
Effective length of database: 792
Effective search space: 309672
Effective search space used: 309672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_g04.g1 MSMg01no519_g04.g1 CHROMAT_FILE:
MSMg01no519_g04.g1 PHD_FILE: MSMg01no519_g04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:05 2005
(232 letters)
>mm_chr2_140350487_140351121
Length = 635
Score = 429 bits (222), Expect = e-125
Identities = 231/234 (98%), Gaps = 3/234 (1%)
Strand = Plus / Plus
Query: 1 aaaccaactaccacttaagagagaaagctgctaaatactcgagaaccacttgcttgcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaccaactaccacttaagagagaaagctgctaaatactcgagaaccacttgcttgcctt 260
Query: 61 cttacccagaactccctcttctatgaatttgtcacaacgtcatgaaaattcatatttatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttacccagaactccctcttctatgaatttgtcacaacgtcatgaaaattcatatttatg 320
Query: 121 aaaatatgcatgaaaagataatgtgtataattgtaaaaatactagaaacagcttaactag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaatatgcatgaaaagataatgtgtataattgtaaaaatactagaaacagcttaactag 380
Query: 181 agagtatgtggttaa-tgaaga-attttgtattcactcagtaga-catggaagg 231
||||||||||||||| |||||| ||||||||||||||||||||| |||||||||
Sbjct: 381 agagtatgtggttaaatgaagatattttgtattcactcagtagaacatggaagg 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 635
Length adjustment: 9
Effective length of query: 223
Effective length of database: 626
Effective search space: 139598
Effective search space used: 139598
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
