XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATTT
TCTTGTTTAAAATGTGCTTGTTGTCCTTTTATATGAATAAGGGGTGGGGG
ACATAAAATGCTGAATCATGGGATCATTAAAAGTGAACCTGGAGAAAATG
ACTGAATTGGTATGTAAACCAAACCAAATCAAACCAAACCAAACCAAACC
AAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACC
AAACCAGGCATTGGTATGCCAGAGCTGAGCTATCCAGAGAGAAAGCTGTC
AAGCAGAAAACACACCATCAGCTTGTACTCCAAGATTTAACTTTGAGCTT
TTTTTTCTCTACTCTCAAACACCCCTTTTCTCAGGAACCCCTCCCCAAGC
AGAGGCAGGTTCTTGGCAGTCTATTGTATTTTATTTTGTTGTATTTTGTT
GTTATTTCTTTTCTTTTCTAATGATAGAGCAAGGGAGTAGTAGATCCAGA
TGTAAGAGATGGCAGAGAGGTACTTGGAGGACAGGATGAGGGAAAACTGC
ATTCTGATTATATTGTATGTGTAAAGAATTTATCTTTTTTTTTTCCATTT
TTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAAGTC
CCCCATACCTACCCACCCCCACTCCCCTACCCAACCACTTCTCCTTTTTG
GTCCTGGCGTTCCTCTGGACTGGTGCATATAAAATTTGCCCGTN

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXCATCATAGGAGAAAATGAGTATGTTTCTGGTGCCAAA
TGTAGGCCAAGCCTAGGTAGCATCCCTCCCTAGGGTGTGAACAATCTAGA
TAATTGTCTCATGAATCTTGGTTGGTGACTTTCATAGATGAAGCTGCTTT
AGGGAATAGAATCTGTAGCAGAAGAAAGTCTCCTGAGAATCATTCTGTGG
ACATAAAGTCCCCATTTAAAAGTGTCAAGTATAAATGGTTGATTCTGCAA
TAACCGCACAAGGTAGTCTATTTTTTCTTTTTCATTTTCTTTTTTACTTT
TTTATTGGGCATTTATTTCAATTACATTTCCAATGCTATCCCAAAAGTCC
CCCACATGCTCCCCCACGCACTCCCCTACCCACCCACTCCCAATTCTTGG
CCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTGCACGACCAATGGG
CCTCTCTTTCCACAGATGGCCGACAAGGGCATCTTCTGATTGATTCATAT
GCAGCTAAAGGCACGAGCTCCGGGGGGGGGTGGTTATTGGTTAGTTCATA
TTGGTGTTCCACCTATANGATTGCAGTTCCCTTCAGCTCCTTGAGTATTT
TCCCTAGCTTCTCCATTAGGGGCCCTGTGATCCATCCAATAGCTGACTGT
GAGCTTCCCCTTCTGTGTTTGTCAGGGCCCGGCATAGTCCCATAAGG

Query= MSMg01no519_i12.g1 MSMg01no519_i12.g1 CHROMAT_FILE:
MSMg01no519_i12.g1 PHD_FILE: MSMg01no519_i12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:16 2005
         (537 letters)



>mm_chr2_97723749_97724686
          Length = 938

 Score =  750 bits (388), Expect = 0.0
 Identities = 441/470 (93%), Gaps = 22/470 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   catcataggagaaaatgagtatgtttctggtgccaaatgtaggccaagcctaggtagcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 catcataggagaaaatgagtatgtttctggtgccaaatgtaggccaagcctaggtagcat 411

                                                                       
Query: 61  ccctccctagggtgtgaacaatctagataattgtctcatgaatcttggttggtgactttc 120
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 410 ccctccctagggtgtgaacaatctagataattgtctcatgtatcttggttggtgactttc 351

                                                                       
Query: 121 atagatgaagctgctttagggaatagaatctgtagcagaagaaagtctcctgagaatcat 180
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 350 atagatgaagctgctttagggaatagaatctgtagcagaagaaaatctcctgagaatcag 291

                                                                       
Query: 181 tctgtggaca-taaagtccccatttaaaagtgtcaagtataaatggttgattctgcaata 239
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tctgtggacaataaagtccccatttaaaagtgtcaagtataaatggttgattctgcaata 231

                                                                       
Query: 240 accgcacaaggtagtctattttttctttttcattttctttttt----actt--ttttatt 293
           ||||||||||||||||||||||||||||||  |||| ||||||    ||||  |||||||
Sbjct: 230 accgcacaaggtagtctattttttcttttt--tttttttttttttttacttatttttatt 173

                                                                       
Query: 294 gggcatttatttcaattacatttccaatgctatcccaaaag-------------tccccc 340
           ||| |||||||||||||||||||||||||||||||||||||             ||||||
Sbjct: 172 gggtatttatttcaattacatttccaatgctatcccaaaagcctccccacacgctccccc 113

                                                                       
Query: 341 acatgctcccccacgcactcccctacccacccactcccaattcttggccctggcgttccc 400
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 acacgctcccccacgcactcccctacccacccactcccaattcttggccctggcgttccc 53

                                                             
Query: 401 ctgtactgaggcatataaagtttgcacgaccaatgggcctctctttccac 450
           ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 52  ctgtactgaggcatataaaatttgcacgaccaatgggcctctctttccac 3


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 938
Length adjustment: 10
Effective length of query: 527
Effective length of database: 928
Effective search space:   489056
Effective search space used:   489056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)