NNTTTTTCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTGTATATATGTTGATGGCAGACAATGCTCTGTGTGAGA
GATGCAGTATCCCTTTAAAATTCTGTGTAGTGTGCCCTCAAAATAAACTT
ATCTGGGAGTTTCTTGGCAGTGGTGGAAAGCCTAGACATGTGAATCCTCC
TCTTACTAAAGGGGAAAAATACTGGACTTGTAATACCAGCTTGAGATAGG
TTTCTGAACAACTAAATGCAAGGCATTCTTTAGATGTAAGATGATGAAAG
CCAAATACTGATGTTTTGACATTTTCCCTGTTTGCATACCAAAGTGTCTA
TAATTTTTAAAGACTTTTTTCATTTTTTTAAAAGTCTTTACAGAGAAAAC
ATCTTAATGGATTTCTTGATAATGAGTAGTTCAGGTCAGTTGACATCTTC
CATTTTGGTTAGTTACTTTTAAAATTTGTGTATATTTTACAAATAAGTAG
GTTTTGCTATACCATCTTTGCATAGGATGCTTTATCAATATTTAACATCC
TTCCCATACTTTCAGCATCTTTTTAGAACAATCTCTGGAAAATATTTTGG
GGAAGAGTTTAAATGATGATTGTTGCAGTTGCCAGATAATCTCTTCTCTA
ATTGACCAGAGGGTGGTGGCACGTGTTCCTCACTATCCACCCCAGTATTC
TAGGTTCCCGAATGATAGATAAACACACACACACACACACACN

TTTTTTTTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCACATAAAACCAGAGAC
ACTGAAACTTATAGAGGAGAAAGTAGGGAAAAGCCTTGAAGATATGGGTA
CAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCA
AGAATCGATAAATGGGACCTCATAAAATTGCAAAGCTTCTGCAAAGCAAA
ATACACTGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAAGGATCT
TTACCTATCCCAAATCGGATAGGGGACTAATATCCAATATATATAAAGAA
CTCAAGAAGGTGGACTCCAGAAAATCAAATAACCCCATTAAAAAATGGGG
CTCAGAGCTGAACAAAGAATTCTCACCTGAGGAATACCGAATGGCAGAGA
AACACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATC
AAAACAACCCTGAGATTCCACTTCACTCCAGTCAGAATGGCTAAGATCAA
AAACTCATGTGACAGCAGATGTTGGCGAGGATGTGGAGAAAGGGGAACAC
TCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACAACTCTGGAAATCA
GTCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACTGGAGGATCCAGC
AATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAAN

Query= MSMg01no520_c19.b1 MSMg01no520_c19.b1 CHROMAT_FILE:
MSMg01no520_c19.b1 PHD_FILE: MSMg01no520_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:08 2005
         (675 letters)



>mm_chr2_48705059_48706133
          Length = 1075

 Score = 1290 bits (667), Expect = 0.0
 Identities = 670/671 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgtatatatgttgatggcagacaatgctctgtgtgagagatgcagtatcccttt 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtatataggttgatggcagacaatgctctgtgtgagagatgcagtatcccttt 264

                                                                       
Query: 65  aaaattctgtgtagtgtgccctcaaaataaacttatctgggagtttcttggcagtggtgg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaattctgtgtagtgtgccctcaaaataaacttatctgggagtttcttggcagtggtgg 324

                                                                       
Query: 125 aaagcctagacatgtgaatcctcctcttactaaaggggaaaaatactggacttgtaatac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagcctagacatgtgaatcctcctcttactaaaggggaaaaatactggacttgtaatac 384

                                                                       
Query: 185 cagcttgagataggtttctgaacaactaaatgcaaggcattctttagatgtaagatgatg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagcttgagataggtttctgaacaactaaatgcaaggcattctttagatgtaagatgatg 444

                                                                       
Query: 245 aaagccaaatactgatgttttgacattttccctgtttgcataccaaagtgtctataattt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaagccaaatactgatgttttgacattttccctgtttgcataccaaagtgtctataattt 504

                                                                       
Query: 305 ttaaagacttttttcatttttttaaaagtctttacagagaaaacatcttaatggatttct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttaaagacttttttcatttttttaaaagtctttacagagaaaacatcttaatggatttct 564

                                                                       
Query: 365 tgataatgagtagttcaggtcagttgacatcttccattttggttagttacttttaaaatt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgataatgagtagttcaggtcagttgacatcttccattttggttagttacttttaaaatt 624

                                                                       
Query: 425 tgtgtatattttacaaataagtaggttttgctataccatctttgcataggatgctttatc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgtgtatattttacaaataagtaggttttgctataccatctttgcataggatgctttatc 684

                                                                       
Query: 485 aatatttaacatccttcccatactttcagcatctttttagaacaatctctggaaaatatt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aatatttaacatccttcccatactttcagcatctttttagaacaatctctggaaaatatt 744

                                                                       
Query: 545 ttggggaagagtttaaatgatgattgttgcagttgccagataatctcttctctaattgac 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttggggaagagtttaaatgatgattgttgcagttgccagataatctcttctctaattgac 804

                                                                       
Query: 605 cagagggtggtggcacgtgttcctcactatccaccccagtattctaggttcccgaatgat 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cagagggtggtggcacgtgttcctcactatccaccccagtattctaggttcccgaatgat 864

                      
Query: 665 agataaacaca 675
           |||||||||||
Sbjct: 865 agataaacaca 875


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space:   708225
Effective search space used:   708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)