CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCTCATTGTGTTATAAGAGCTGAT
AACAGGAGATAGCAAGGTGTTCCACAAAATGACCTTATCTGCTTTTGTTA
GGTTGGCTCCCTTGTCAAGCTTAAGGTGTATGAACACAATTTCAGATGAA
CAACCGGAGACTTGAAATTGTTAAATCAATCCATTAGTTTAAAATGCACA
TGTTTAATTTTTTATTCAAGAAAAGTGTTTTAACTGTTTATTTTCTGATT
TTTAATTACTAGACAGAATTTATGATACCAGAGATACTGTGACACTTAAG
CCACATGACTGGTGAGGTGTGGTATTTATGAGTACCATCGTGGCATGAAG
AAACGAATTTTATGTGAAACTGTCACAGATACAAGCCATATAAACGCAGT
GAGCTCAAGTTCCAACTGAGCCAAACTACTCCATTGTGCACTGCTCCAAA
GATGCTTTGGAGAGTAGCACTATTCTGAAAAAAATAACTTTGTCTTATAT
TTAAAAAAAAAAAGAAAAAAGAAAATGAAAAAAATCTCTGAAAGATCCTG
GAATGCCATTTCTTTCCAAAAGAGTAGCCATATTTGAATTTTCTTAGCAG
CTTGCTGAGAGAGTGCAAAGCTAACAAGAATCAAAACAGACTCTTTACAT
AGTTTGTTTGGGTCTAGAGGAAATCTGTCCATGAGCTTTTGTGAGGGGGC
CAACATGTCAGCATATGCCTGACTACAGAGAGTTAN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTACCCCATTTTT
AATAGGGTTATTTGGTTTTCTGGAGTCCAACTTCTTGAATTCCTTATATT
TATTCGATATTAGCCCCCTATCAGATTTAGGATTGGTAAAGATCTTTTCC
CAATCTGTTGGTTGCCTTTTGGTCTTATTGACAGTGTCCTTTGCCTTACA
GAAGCTTTGCAACTTTATGAGGTCCATTTGTTGATTCTTGATCTTACAGC
ACTAGCTATTGGTGCTCTGTTCAGGAATCTTTCCCCTGTGCCCATATTTT
CGAGGCTCTTTCCCCACTGTCTCCTCCTTAACATTCAGTGTCTCTGGTTT
TATGTGGAGTTCTTTGAGCTTTGTAGAAGGAGATAAAAATGGATCAATTC
ACATTCTTCTACATGCTAACTGCCAGTTGACCCAGCACCATTTGTTGAAG
AAGCTGTCTTCTTTCCACTGGATGGCTTTAGGTCCTTTGTCAAAGATCAA
GTGACCATAGGTATGTGGTTTCATTTTTGGGTCTTCAATTCTATTCCATT
AATCTACCTGTCTGTCATTGTACTAGTACCATTTAGTTTTTATCACAATT
TCTTTGTACTACAGCTTGAAGTCTGGCATGGTGATTCCACCAGAGGTTCT
TTTATTGTTGAGAATAGTTTTTGCTATCCTAGATTTTTTGTTATTCCAGA
TGAATTTGCAAATAAACAGGCTAAGAAN

Query= MSMg01no520_d05.b1 MSMg01no520_d05.b1 CHROMAT_FILE:
MSMg01no520_d05.b1 PHD_FILE: MSMg01no520_d05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:10 2005
         (656 letters)



>mm_chr2_47845973_47847028
          Length = 1056

 Score = 1212 bits (627), Expect = 0.0
 Identities = 650/659 (98%), Gaps = 4/659 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctcattgtgttataagagctgataacaggagatagcaaggtgttccacaaaatgacctt 60
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 199 cctcattgtgttataagagctgataacaggagatagcaaagtgttccacaaaatgacctt 258

                                                                       
Query: 61  atctgcttttgttaggttggctcccttgtcaagcttaaggtgtatgaacacaatttcaga 120
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atctgcttttgttagattggctcccttgtcaagcttaaggtgtatgaacacaatttcaga 318

                                                                       
Query: 121 tgaacaaccggagacttgaaattgttaaatcaatccattagtttaaaatgcacatgtt-- 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 319 tgaacaaccggagacttgaaattgttaaatcaatccattagtttaaaatgcacatgttgt 378

                                                                       
Query: 179 -taattttttattcaagaaaagtgttttaactgtttattttctgatttttaattactaga 237
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttaattttttattcaagaaaagtgttttaactgtttattttctgatttttaattactaga 438

                                                                       
Query: 238 cagaatttatgataccagagatactgtgacacttaagccacatgactggtgaggtgtggt 297
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 439 cagaatttatgataccagagatactgtgacacttaagccacatgactggtgatgtgtggt 498

                                                                       
Query: 298 atttatgagtaccatcgtggcatgaagaaacgaattttatgtgaaactgtcacagataca 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atttatgagtaccatcgtggcatgaagaaacgaattttatgtgaaactgtcacagataca 558

                                                                       
Query: 358 agccatataaacgcagtgagctcaagttccaactgagccaaactactccattgtgcactg 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agccatataaacgcagtgagctcaagttccaactgagccaaactactccattgtgcactg 618

                                                                       
Query: 418 ctccaaagatgctttggagagtagcactattctgaaaaaaataactttgtcttatattta 477
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctccaaggatgctttggagagtagcactattctgaaaaaaataactttgtcttatattta 678

                                                                       
Query: 478 aaaaaaaaaagaaaaaagaaaatgaaaaaaatctctgaaagatcctggaatgccatttct 537
           ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 679 aaaaaaaaa-gaaaaaagaaaatgaaaaaactctctgaaagatcctggaatgccatttct 737

                                                                       
Query: 538 ttccaaaagagtagccatatttgaattttcttagcagcttgctgagagagtgcaaagcta 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttccaaaagagtagccatatttgaattttcttagcagcttgctgagagagtgcaaagcta 797

                                                                      
Query: 598 acaagaatcaaaacagactctttacatagtttgtttgggtctagaggaaatctgtccat 656
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 acaagaatcaaaacagactctttacatagtttgtttgggtctagaggaaatctgtccat 856


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)