CGTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGG
AATTCTACCTCTTCTTCTGAAGAATATGGGCTTCCAGGCAGCTAGAATGA
GGGTCTTAAAGCCCACACCCACAGTGATACACCTACTCCCACAAGGCTAC
ACCTTCTAATAGTACCACTCCCTGGACCGAGCATATACAAACCATCACAG
GGACTGAGAGGTAGTGCTATGTAGGCAGTTAGGAGAGAAAAATCATCAAC
AATCCCACCCAGATGTGGCCCCTGTGTGCTACAATACTGAACTTCCTGGC
AAGACATGCCAGCCAATATAGCCATGGCATGAATGATCCAGAAATAACCA
ACAGCTTCTTGGTTACGTTTTAAGCTTGCTGCACAGGAAGAAAACATGGC
TGATACTGTAGACCTGATCAGAAGGCTACAGCTAGTCATAGGGAGGTCAC
AGGCTGCATGGAGAAACATACTGCTTGTGCTTTTCTAAATCGAAATGTAG
TAAACTACCTTCTAACTATTTGTGTTTAAACCCATAGACTAGTGCTGCTC
TCAGGCTTGGTTGGAAAGTCTGTTTTTGGCAGTGGGCAATCGTCAAAGTA
GGGATTCACAACTGAGCAAAGTTCTGGTAATCGGTGACTATAGATTGCTT
GTCCCTAAACAGGACATCTATGCCACCCACTCTGAAACCCCAGGAACATC
CAGAGTAAGTCACAAAAAGACATGGGAGCTGGAAGATGAGGAAGAGTGCC
TTAAGTGCTGTT

TATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGCACAGGGAATACAGTTAGCAGTAGAG
TGCTTGCCTAGGCATGATTGAGGCGCTGAGTCAAAACCCAAACATTTGTT
CCTTACTTTGGCTTTAAAAACCTCCTCTGCTTCCACCTTATTTTATTTTA
CTGTTCCGTAGCAATGCTCTGCCTTCCTCAAATGCACGATCTCTGGGTGG
AGGCACACATGTATGAGGAGTGGACTCATGGTAAATAGGACTGGGATGCT
AAGCTTTCCAGGAAGCGAAAATGCATCAAAAAGTGCCAGGAAGCAGAGGC
AGGGGGAATCTCTGTGGGTTTGAGGCCAGCCAGGGATGCAGGGTGAGACC
ATGCCTCAAAATAAAACCAACAACAACACAAATCTAGATGAAAATATTGA
GATATCTTTACACGTTTTAACTGGGGGGGGAAATCATAATCATTGTTGTT
GGGTGTAGTACCTCATATCTGTAGTGGCAGCACTGGAAGCCAGAGGCAGG
GAGAGCTACGAGAGTCTGAGACCAGCCTGGCCTGCATAATGGAGCAACTC
TGTCTCAAAAGACCAAAAATAACAAAACCTAAAAAAGATTCATCATTGTC
TATTCACGTACATTGACTGAAAACTCTTGCACAGCCAAAGAAAGTGGAAA
GTTACAGATCAGGAAATTTTTTGGTTTTCTAAGACAGAGTCTATCTGTAA
ATCCTGG

Query= MSMg01no520_g02.g1 MSMg01no520_g02.g1 CHROMAT_FILE:
MSMg01no520_g02.g1 PHD_FILE: MSMg01no520_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:25 2005
         (556 letters)



>mm_chr2_131995038_131995992
          Length = 955

 Score =  975 bits (504), Expect = 0.0
 Identities = 545/562 (96%), Gaps = 7/562 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcacagggaatacagttagcagtagagtgcttgcctaggcatgattgaggcgctgagtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 agcacagggaatacagttagcagtagagtgcttgcctaggcatgattgaggtgctgagtc 260

                                                                       
Query: 61  aaaacccaaacatttgttccttactttggctttaaaaacctcctctgcttccaccttatt 120
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 aaaacccaaacatttgttccttactttggctttaaaaacctcccctgcttccaccttatt 320

                                                                       
Query: 121 ttattttactgttccgtagcaatgctctgccttcctcaaatgcacgatctctgggtggag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttattttactgttccgtagcaatgctctgccttcctcaaatgcacgatctctgggtggag 380

                                                                       
Query: 181 gcacacatgtatgaggagtggactcatggtaaataggactgggatgctaagctttccagg 240
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 gcacacatgtatgaggagtggactcatggtaaatagga-tgggatgctaagctttccagg 439

                                                                       
Query: 241 aagcgaaaatgcatcaaaaagtgccaggaagcagaggcagggggaatctctgtgggtttg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aagcgaaaatgcatcaaaaagtgccaggaagcagaggcagggggaatctctgtgggtttg 499

                                                                       
Query: 301 aggccagccagggatgcagggtgagaccatgcctcaaaataaaaccaacaacaacacaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||
Sbjct: 500 aggccagccagggatgcagggtgagaccatgcctcaaaataaaaccaccaccaacaaaaa 559

                                                                       
Query: 361 tctagatgaaaatattgagatatctttacacgttttaactgggggggga------aatca 414
           |||||||||||||||||| |||||||||||||||||||||||||||||       |||| 
Sbjct: 560 tctagatgaaaatattgaaatatctttacacgttttaactgggggggggggggggaatcg 619

                                                                       
Query: 415 taatcattgttgttgggtgtagtacctcatatctgtagtggcagcactggaagccagagg 474
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 taatcattgtcgttgggtgtagtacctcatatctgtagtggcagcactggaagccagagg 679

                                                                       
Query: 475 cagggagagctacgagagtctgagaccagcctggcctgcataatggagcaactctgtctc 534
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 680 cagggagagctacgagagtctgagaccagtctggcctgcataatggagcaactctgtctc 739

                                 
Query: 535 aaaagaccaaaaataacaaaac 556
           ||||||||||||||||||||||
Sbjct: 740 aaaagaccaaaaataacaaaac 761


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 955
Length adjustment: 10
Effective length of query: 546
Effective length of database: 945
Effective search space:   515970
Effective search space used:   515970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)