TTTATATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCATTTCACTGCCAGAGAAGTGCAACAGTGAGCTCATGACT
GTGGTCTACTGGTCTCACCAAATTCCCCACCATCAACTAAATCAACTGGC
CTGATAGAAAGATGGAATGGCCTTTTAAGATTTATTTATTTTATTTATAT
GAGTACACTGTAGCTGTCTTCAGACACATCAGAAGAGGGCATCAGATCCC
ATTACAGATGGTTGTGAGCCAACAGGTGGTTACTGGGAATTGAACTCAGA
ACCTTTGGAGAGCCATCTCTCCGGCCCTGTAATGGCCTTTAGAAGACACA
ATTATAGTAGCAATTAGGTGGCAGCATCCTGGAGGACTGAGGCAGAGTTC
TCCAGAAGGTGGTGTGTGCTTTGAATTGGTGTTCAATATATGATTTCTCC
CACAGCCAGGAACAAAGGAGTGGAAAGGTGAACAGTTGCACTCTCACTCA
CTTCAATGAGAAACCACAAATGGCTAATCCAGATAGGATGAAAAGGAGCA
CAGATGCTTTGGAAATGTAGGAATGGGTTACTCCTCCAGGAAAGGAACCA
GAACTTACTGAGAGTGGAGAAGATACAGGATGGGTACTAGATGAAAGCCA
TTAGAAATACCATCTAAGTTCATGTGACCAGTTGCAGAAATGAAGATTAT
AAGTGATGTGAATGTTTCTGTCATATGTTGTTAAGAATACGCTTGCACN

NNNTTCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTGTGAATGAACCATCA
ACCACCCACCCTGTCTGTCACAAAGACTCCGAGGCAACTGCTGCAGTTTT
AAGTGTGTAATTTTAAGTAATTTTGATTTTGCTTCTCAGTGTTGGGATGG
GATCCAGGTCCTTGTGTTCTCTAGGCAAGCACTCTGCCTCTGAGTTGGGA
CACCCAGCCCTAGGCTACATCTTGAAATCACCTGGGGCTGCCTAGACCAT
CAGTGGTCTTCAAGTGGTACCCAAGTGTCCCGGTGATTAACACCTCAGGA
TGCTCCCACCAAGAGCTACCAGGCACAATTCTTAAAGTGACAGCACCGTG
GGCATGTAGCCTCTTGCTTGGCCACTAACGTCTGAATAGTGCACACTCCT
TATTTCGCTCAAGTACTTTGGGCCCCTTTATCCAACATAAACATAAAGCT
GATTACAAATTTTCTAGAAGCCACATTTAAAAAAAGAAAAAATCCTTTAA
TCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAGTTCGAG
GCCAGCCTGGTCTACAAAGTGAGTTCCTGTACAGCCAAGGCTACACAAAG
AAACCCTGTCTCGAANAACCTAGAAAGAAAGAAAGAGAGAGAGAGTGAGA
GAGAAAAAAAGACTAGCAGTTCAAATTAATTTTATAGATGTTATTTAACC
CACGAGA

Query= MSMg01no522_h02.g1 MSMg01no522_h02.g1 CHROMAT_FILE:
MSMg01no522_h02.g1 PHD_FILE: MSMg01no522_h02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:03 2005
         (585 letters)



>mm_chr2_145716294_145717278
          Length = 985

 Score = 1127 bits (583), Expect = 0.0
 Identities = 583/583 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   attgtgaatgaaccatcaaccacccaccctgtctgtcacaaagactccgaggcaactgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgtgaatgaaccatcaaccacccaccctgtctgtcacaaagactccgaggcaactgct 260

                                                                       
Query: 61  gcagttttaagtgtgtaattttaagtaattttgattttgcttctcagtgttgggatggga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagttttaagtgtgtaattttaagtaattttgattttgcttctcagtgttgggatggga 320

                                                                       
Query: 121 tccaggtccttgtgttctctaggcaagcactctgcctctgagttgggacacccagcccta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccaggtccttgtgttctctaggcaagcactctgcctctgagttgggacacccagcccta 380

                                                                       
Query: 181 ggctacatcttgaaatcacctggggctgcctagaccatcagtggtcttcaagtggtaccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctacatcttgaaatcacctggggctgcctagaccatcagtggtcttcaagtggtaccc 440

                                                                       
Query: 241 aagtgtcccggtgattaacacctcaggatgctcccaccaagagctaccaggcacaattct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagtgtcccggtgattaacacctcaggatgctcccaccaagagctaccaggcacaattct 500

                                                                       
Query: 301 taaagtgacagcaccgtgggcatgtagcctcttgcttggccactaacgtctgaatagtgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaagtgacagcaccgtgggcatgtagcctcttgcttggccactaacgtctgaatagtgc 560

                                                                       
Query: 361 acactccttatttcgctcaagtactttgggcccctttatccaacataaacataaagctga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acactccttatttcgctcaagtactttgggcccctttatccaacataaacataaagctga 620

                                                                       
Query: 421 ttacaaattttctagaagccacatttaaaaaaagaaaaaatcctttaatcccagcacttg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttacaaattttctagaagccacatttaaaaaaagaaaaaatcctttaatcccagcacttg 680

                                                                       
Query: 481 ggaggcagaggcaggcagatttctgagttcagttcgaggccagcctggtctacaaagtga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaggcagaggcaggcagatttctgagttcagttcgaggccagcctggtctacaaagtga 740

                                                      
Query: 541 gttcctgtacagccaaggctacacaaagaaaccctgtctcgaa 583
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttcctgtacagccaaggctacacaaagaaaccctgtctcgaa 783


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space:   560625
Effective search space used:   560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)