Query= MSMg01no522_h12.b1 MSMg01no522_h12.b1 CHROMAT_FILE:
MSMg01no522_h12.b1 PHD_FILE: MSMg01no522_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:04 2005
(605 letters)
>mm_chr2_93511905_93512909
Length = 1005
Score = 1079 bits (558), Expect = 0.0
Identities = 588/598 (98%)
Strand = Plus / Minus
Query: 8 gaattctcagggtcttccctataagcccccagaagatgagctcaccaaggtccccgctgt 67
|||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gaattctcggggccttctctataagcccccagaagatgagctcaccaaggtccccgctgt 746
Query: 68 ggtagcagatcattgggtctggcctagtagggacctccttctccaggtggtcctttgtcc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ggtagcagatcattgggtctggcctagtagggacctccttctccaggtggtcctttgtcc 686
Query: 128 ctgtctttttactctgtgtctgaggcccgagactaaattctgtcttttctgtccccaagt 187
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 685 ctgtctttttactctgtgtctgaggcctgagactaaattctgtcttttctgtccccaagt 626
Query: 188 tggctgaagcttttaacctgactgcctttaatgtcctcctatcctctaggaagtaccgtg 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tggctgaagcttttaacctgactgcctttaatgtcctcctatcctctaggaagtaccgtg 566
Query: 248 gtacctggtgcctccctcgtgctcccatgcgtgtttcagtgcagagacttggtgtgtcct 307
||||||||||||||||||||||| |||| | |||||||||||||||||||| ||||||||
Sbjct: 565 gtacctggtgcctccctcgtgcttccatacatgtttcagtgcagagacttgttgtgtcct 506
Query: 308 cccatctctgacccccagctgtgcctctgtgtctcagggtcgtgcaaccacaggcttgcc 367
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 505 cccatctctgacccccagctgtgcctctgtgtctcagggtcatgcaaccacaggcttgcc 446
Query: 368 tctataagcccccgggaggagagctcaccaaagtccctgctgtgcctctattctggatgt 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctataagcccccgggaggagagctcaccaaagtccctgctgtgcctctattctggatgt 386
Query: 428 cgcagccaggaccaccccgttcccagcccacccgggcctggcccactcagcacaggcctc 487
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 385 cgcagccaggaccaccccgttcccagcccaccagggcctggcccactcagcacaggcctc 326
Query: 488 tctggaggaccaggccattcaaggaaccaactgtcttggaggaggcctctctaaccgcag 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctggaggaccaggccattcaaggaaccaactgtcttggaggaggcctctctaaccgcag 266
Query: 548 cccatctggggccagggtggggtggcccagggcggggaggcttcagtctcattgtctt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cccatctggggccagggtggggtggcccagggcggggaggcttcagtctcattgtctt 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_h12.g1 MSMg01no522_h12.g1 CHROMAT_FILE:
MSMg01no522_h12.g1 PHD_FILE: MSMg01no522_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:04 2005
(620 letters)
>mm_chr2_93373696_93374715
Length = 1020
Score = 1137 bits (588), Expect = 0.0
Identities = 613/623 (98%), Gaps = 3/623 (0%)
Strand = Plus / Plus
Query: 1 atgggtacaatttgaaggtatccacacatgtagcttggaagggatttgaggatcagctct 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 atgggtacaatttgaaggtatccatacatgtagcttggaagggatttgaggatcagctct 260
Query: 61 caagaaagtctgcagcctttgggggccctcacaatagactcccaagccacagataaaatt 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caagaaggtctgcagcctttgggggccctcacaatagactcccaagccacagataaaatt 320
Query: 121 tcacaatggtttttgacatacgatcattaaaaatcttttaaaatgaaattttaaatagtt 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcacaatggtttttgacatacggtcattaaaaatcttttaaaatgaaattttaaatagtt 380
Query: 181 actttaattctttatcttagctctttaataatgttttctttagccaagatattttgagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actttaattctttatcttagctctttaataatgttttctttagccaagatattttgagtg 440
Query: 241 tcacttgacatatactcagtacagaaatgattagagccaagaagatggcttagtcaatag 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagttgacatatactcagtacagaaatgattagagccaagaagatggcttagtcaatag 500
Query: 301 ctctttcacaagcatgaaggtctaagttcaaatcccaagaaagcacataaaaagccagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctctttcacaagcatgaaggtctaagttcaaatcccaagaaagcacataaaaagccagat 560
Query: 361 gcgctggctgacactggaagagtgaagcagaaatgagatccggaaactcatcgtgaggcc 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 gcgctggctgacactggaagagtgaagcagaaatgaaatccggaaactcatcgtgaggcc 620
Query: 421 ggccagcccaagcatatcaaggcgcttcagaagctgtgagacaccctgactcagaaaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggccagcccaagcatatcaaggcgcttcagaagctgtgagacaccctgactcagaaaata 680
Query: 481 aaggcgcagagagacgctagcttaaaagaaataagaaccctgtctcanaaaa---taaag 537
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 681 aaggcgcagagagacgctagcttaaaagaaataagaaccctgtctcaaaaaaaaataaag 740
Query: 538 tggagagcaattggggataacatctggactacacacacatacacacacacacacacacac 597
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 741 tggagagcaattggggataacatctggactacacacacatacacacacacatacacacac 800
Query: 598 acacacacacacacacacacaca 620
|||||||||||||||||||||||
Sbjct: 801 acacacacacacacacacacaca 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 70
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
