NNNNAACCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCAAGACTACCAGCCCAGGGATGGCACCACCCACAATGGGC
CCTCCTCCCTTGATCACTATTTGAGAAAATTCCTTACAGCTGGATCTCAT
GGAGGCATTTCCTTAACTCTCTGTGATAACTCCAGCTTATGTCAAGTTGA
CACAAAACCATCCAGTACAGTATATGATAGATAGATAGATAGATAGATAG
ATAGATAGATAGATAGATAGATAGATATTCTGCAGATATCTGCATAGGTG
GTGATTTTTGATTGCCTCAATGAAATTCTCTTCTTGATAATGGTGATAAT
TGCTGCTTATATAAAAATTTATATGCATTTATTCTCTCCCCACCCAAGCT
CAAGGACCTTGGATTAGAGGAGTTGTTAAAAGATTGTAAGCGCCAGAGTT
TGGGAAAGATTGGAATGAAACATCACTACATGATAGTCAATTGCACTCAT
CAACTGTGCTTGCCTGTACATGACCTGAACAAGATCAAGCTGGTCAGCAT
TCCAGCATAGATAGGGAAAGGTTCATGAGCTCCCACACTTATAGCTAAGA
GCAGTTGATGGCTTCTGGGGGAGGGGAAGGTCTATTTTCTTAANGTGTGT
GGCCCCTGGTAGGCTGAACATACTCCACTGGATGGCTCCACAGCTATGAG
TACATGGGTAAAGCAATTGGGGATTGGTGAGTATGTAAAAAAAAGACATG
AAGTTGAGGAAGGAGTAA

NNTTTCGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCAGGGCTGATGCATACAT
GAACTCATAGAGATTGTGCCAACATGCACAGGTCTAAGCTGGAAGGCATT
CCAGTGCTGAGAGAAGTGAACAGGGTCTCCCATTCCTAACCAAGAAGCTA
TCTCCAGTTGATGACCACGCACAAAGAGAAAATTAGTTTCCTCAGGTAAT
TTTTTATGCTCATCTCTTTAGACTTACTAGAAAGGCAGTAAAATGGCAGA
AAAGACTCATCAGTACCCACAAATGTGCCTACATGACATAAACTAACACA
ACATGCTTCTGTATATTTATGTCTCATAAGTCTGGGAAGAATTTATGTCT
CGTAAGTCTCAACTGACTTCAATTTTCTAATGTTTAATTTATTTTGTGAA
TGAAATAGAAATAAGATATTCTTAAACATTAAACGTATTCACTGATGTAT
TTCAATTACAATTTGGTATAATGAAAATAGTACTACTTAGCATAATGCCT
GCATAATGGAAAGATGGGGGGTATCTCAGGTGAAGAACTTATAGCTAAAA
TGGTTTGTAGTCAAGAATTATTTTGAATAATTTGATTCTGCCAGTGTATT
AATATACATCAATATCCTAGATTATAGACATTCCAGAGTCCATTAGTCTT
AATCAATGATTGAGAACAAGNTNCTATAGCCTTTTATTTTTTTAAAAAAG
AGGATTATTTATTTTATG

Query= MSMg01no522_h21.g1 MSMg01no522_h21.g1 CHROMAT_FILE:
MSMg01no522_h21.g1 PHD_FILE: MSMg01no522_h21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:06 2005
         (520 letters)



>mm_chr2_51214041_51214960
          Length = 920

 Score = 1006 bits (520), Expect = 0.0
 Identities = 520/520 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcagggctgatgcatacatgaactcatagagattgtgccaacatgcacaggtctaagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 atcagggctgatgcatacatgaactcatagagattgtgccaacatgcacaggtctaagct 824

                                                                       
Query: 61  ggaaggcattccagtgctgagagaagtgaacagggtctcccattcctaaccaagaagcta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 ggaaggcattccagtgctgagagaagtgaacagggtctcccattcctaaccaagaagcta 764

                                                                       
Query: 121 tctccagttgatgaccacgcacaaagagaaaattagtttcctcaggtaattttttatgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 tctccagttgatgaccacgcacaaagagaaaattagtttcctcaggtaattttttatgct 704

                                                                       
Query: 181 catctctttagacttactagaaaggcagtaaaatggcagaaaagactcatcagtacccac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 catctctttagacttactagaaaggcagtaaaatggcagaaaagactcatcagtacccac 644

                                                                       
Query: 241 aaatgtgcctacatgacataaactaacacaacatgcttctgtatatttatgtctcataag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 aaatgtgcctacatgacataaactaacacaacatgcttctgtatatttatgtctcataag 584

                                                                       
Query: 301 tctgggaagaatttatgtctcgtaagtctcaactgacttcaattttctaatgtttaattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 tctgggaagaatttatgtctcgtaagtctcaactgacttcaattttctaatgtttaattt 524

                                                                       
Query: 361 attttgtgaatgaaatagaaataagatattcttaaacattaaacgtattcactgatgtat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 attttgtgaatgaaatagaaataagatattcttaaacattaaacgtattcactgatgtat 464

                                                                       
Query: 421 ttcaattacaatttggtataatgaaaatagtactacttagcataatgcctgcataatgga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ttcaattacaatttggtataatgaaaatagtactacttagcataatgcctgcataatgga 404

                                                   
Query: 481 aagatggggggtatctcaggtgaagaacttatagctaaaa 520
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aagatggggggtatctcaggtgaagaacttatagctaaaa 364


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space:   464100
Effective search space used:   464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)