CGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAACAACT
CACTTAAAGAAATACAGGAGAACACTGCTAAGGAGTTACAAGTCCTTAAA
GAAAAACAGGAAAACACTGCTAAAGAGTTACAAGTCCTTAAAGAAAAACA
GGAAAACACAACCAAACAGGTAGAAGTCCTTATAGAAAAACAGGAAAACA
CATCCAAACAGGTGATGGAAATGAACAAAACCATACTAGACCTAAAAAGG
GAAGTAGACACAATAAAGAAAACCCAAAGTGAGGCGACGCTGGAGATAGA
AACCCTAGGAAAGAAATCTGGAACCATAGATGCCAGCATCAGCAACAGAA
TACAAGAGATGGAAGAGAGAATCTCAGGTGCAGAAGACTCCATAGAGAAC
ATCGGCACAACAATCAAAGAAAATGGAAAATGCAAAAAGATCCTAACTCA
AAACATCCAGGAAATCCAGGACACAATGAGAAGACCAAACCTACGGATAA
TAGGAGTGGATGAGAATGAAGATTTTCAACTCAAAGGACCAGCAAACATC
TTCAACAAAATTATTGAAGAAAACTTCCCAAATCTAAAGAAAGAGATGCC
CATGAACATACAAGAAGCCTACAGAACTCCAAATAGACTGGACCAGAAAA
GAAATTCCTCCCGACACATAATAATCAGAACACCAAATGCACTANATAAA
GATAGAATACTAAAAGCAGTAAGGGAAAAAGGTCAAGTAACATATAAAGG
CAAGCCTATCAGAATTACACCAGN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTTCAGGGTCCACCTTGCTTAGCACACATCCCCATGT
CTCCCTCTGTCCCCCAACCCCACAATCCCCAGGCCCGGATGCTTCTGGAC
TGAGGACACTGCCATGTTTGCTTGTTACCCTGAGTCTCTCGAGGAGGTGA
GCTGGGGCCGGGGGAAGTGATCTTGGAACTTGAAAGTCCTGGAGGTGGGA
ACGGGACTGGCAGGAGTGAGGAAAGGAATTTTGTAGCTGGGAAAGAGGAG
GAGCCAGTAAGAGGAGGAGAGACAGAGCTGATAGTTGGAGGGAAAGATGG
AGTGTGGAGAGAGAAGTTTTTCACCAAAATAAGTATGTTTTTGGCCAACG
CAAGAAGACGATCTTGGGAGAGAGGAAGAATAAGGAAGAGGAACAAAGTC
AGAATTCGAGTCCGAAGGGAAGTTAGGCCCGGGAGAGTGGGTCTTTGTCG
AAGAAGAGAAGATATAAGCCTGCGTGGTGGTGGGCAAATAAAAGTGGGAA
GAACTGAGGGTCGGATGGGGAGAAAGAGATGCTAAATTGGGTGGAGGGGA
GTCTACAAACTGAAAGGACCTGAGCTGGACACCCTGAGGGTACTGCATTC
TGGAGCGACACCTGGTCCTTGTTTTTAGGCAACATTGCCTTGTTTCCATT
ATGGAAGTGGATGGGGTTGACTAGATCAGTGGTTAAAGACCCCACATTCT
TGTGTGGGGATTN

Query= MSMg01no524_d05.g1 MSMg01no524_d05.g1 CHROMAT_FILE:
MSMg01no524_d05.g1 PHD_FILE: MSMg01no524_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:24 2005
         (541 letters)



>mm_chr2_78437683_78438622
          Length = 940

 Score =  977 bits (505), Expect = 0.0
 Identities = 532/541 (98%), Gaps = 1/541 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcagggtccaccttgcttagcacacatccccatgtctccctctgtcccccaaccccaca 60
           ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||
Sbjct: 740 ttcagggtccaccttgcttagcacacatccccatgcctccctctgtccccaaacccc-ca 682

                                                                       
Query: 61  atccccaggcccggatgcttctggactgaggacactgccatgtttgcttgttaccctgag 120
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acccccaggcccggatgcttctggactgaggacactgccatgtttgcttgttaccctgag 622

                                                                       
Query: 121 tctctcgaggaggtgagctggggccgggggaagtgatcttggaacttgaaagtcctggag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctctcgaggaggtgagctggggccgggggaagtgatcttggaacttgaaagtcctggag 562

                                                                       
Query: 181 gtgggaacgggactggcaggagtgaggaaaggaattttgtagctgggaaagaggaggagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgggaacgggactggcaggagtgaggaaaggaattttgtagctgggaaagaggaggagc 502

                                                                       
Query: 241 cagtaagaggaggagagacagagctgatagttggagggaaagatggagtgtggagagaga 300
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 501 cagtaagaggaggagagacagagctgacagttggagggaaagatggagtgtggagaggga 442

                                                                       
Query: 301 agtttttcaccaaaataagtatgtttttggccaacgcaagaagacgatcttgggagagag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtttttcaccaaaataagtatgtttttggccaacgcaagaagacgatcttgggagagag 382

                                                                       
Query: 361 gaagaataaggaagaggaacaaagtcagaattcgagtccgaagggaagttaggcccggga 420
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagagtaaggaagaggaacaaagtcagaattcgagtccgaagggaagttaggcccggga 322

                                                                       
Query: 421 gagtgggtctttgtcgaagaagagaagatataagcctgcgtggtggtgggcaaataaaag 480
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagtgggtctttgttgaagaagagaagatataagcctgcgtggtggtgggcaaataaaag 262

                                                                       
Query: 481 tgggaagaactgagggtcggatggggagaaagagatgctaaattgggtggaggggagtct 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 tgggaagaactgagggtcggatggggagaaagagatgctaaattgggtggagcggagtct 202

            
Query: 541 a 541
           |
Sbjct: 201 a 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 940
Length adjustment: 10
Effective length of query: 531
Effective length of database: 930
Effective search space:   493830
Effective search space used:   493830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)