Query= MSMg01no524_e12.b1 MSMg01no524_e12.b1 CHROMAT_FILE:
MSMg01no524_e12.b1 PHD_FILE: MSMg01no524_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:30 2005
(583 letters)
>mm_chr2_3733379_3734361
Length = 983
Score = 1064 bits (550), Expect = 0.0
Identities = 571/578 (98%)
Strand = Plus / Plus
Query: 6 gaattctttgtggctttccaaattagatctcaggcagcagaggcctgcatcactgagttc 65
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctttgtggcattgcaaattagatctcaggcagcagaggcctgcatcactgagttc 265
Query: 66 tggctcgcccacaaagtatttgctccccaactctcagccccagcttcattttgttctatt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tggctcgcccacaaagtatttgctccccaactctcagccccagcttcattttgttctatt 325
Query: 126 tctatctgcttcttaatttagccatgtgactgcattcaaacccttttatctcgtccccat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tctatctgcttcttaatttagccatgtgactgcattcaaacccttttatctcgtccccat 385
Query: 186 ctggaaggcaatctgggttggtcctgaatttttattcctgtggaatagaagagagtgacg 245
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ctggaaggcaatctgggttggtcctgaatttttattcctgtggaatagaagagagtgaca 445
Query: 246 gagtccccactgcccctccgagggtcactgcgatgccgaggtgaactgagggatttcaca 305
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gagtccccactgctcctccgagggtcactgcgatgccgaggtgaactgagggatttcaca 505
Query: 306 gatcaggtggcaagggctcatggcagacaggaagaagctgacattattcacacgcagcta 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gatcaggtggcaagggctcatggcagacaggaagaagctgacattattcacacgcagcta 565
Query: 366 gcaaatcagagaaatgagggcttagatgagggctgttgttttccagcaagggccagtgtc 425
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gcaagtcagagaaatgagggcttagatgagggctgttgttttccagcaagggccagtgtc 625
Query: 426 tggcaggcaaagaactaaggagacagtctcgtgagaaggccagagcttgcttttaaaacc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tggcaggcaaagaactaaggagacagtctcgtgagaaggccagagcttgcttttaaaacc 685
Query: 486 gggaagacaatggcgaccaatactgggaaggaaatggaaagatcacataggaaaggaaag 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gggaagacaatggcgaccaatactgggaaggaaatggaaagatcacataggaaaggaaag 745
Query: 546 ctctcttcttcgtcttagtagtgtcacccccagtgaag 583
|||||||||||||||||||||||||||| || ||||||
Sbjct: 746 ctctcttcttcgtcttagtagtgtcacctccggtgaag 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_e12.g1 MSMg01no524_e12.g1 CHROMAT_FILE:
MSMg01no524_e12.g1 PHD_FILE: MSMg01no524_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:30 2005
(605 letters)
>mm_chr2_3910472_3911479
Length = 1008
Score = 1069 bits (553), Expect = 0.0
Identities = 594/609 (97%), Gaps = 5/609 (0%)
Strand = Plus / Minus
Query: 1 tcccatgactgaacatctatgtggtttttactcgttgtttgctatttcaggtgcttgtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 tcccatgactgaacatctatgtggtttttactcgttgtttgctatttcaggtgcttgtaa 749
Query: 61 acaatttatctttttatagaatgcatgtgtctttgcctaatatattttcatattaaaatg 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 acaatttatctttttataggatgcatgtgtctttgcctaatatattttcatattaaaatg 689
Query: 121 taaaatgtagtcactgttcagagtttgggctttgggtaagtgactgggtctgactgtatc 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 taaaatttagtcactgttcagagtttgggctttgggtaagtgactgggtctgactgtatc 629
Query: 181 aatgagctagtccgtgagttcatcttctgatgagctattggaaagtaatagaaactcagg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 628 aatgagctagtccgtgagttcatcttctgatgagctattggaaagtaatagaaattcagg 569
Query: 241 gaacgatatctacttgagaggaagtggtcccctagtgtgcctgtgtggcctggctcttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gaacgatatctacttgagaggaagtggtcccctagtgtgcctgtgtggcctggctcttgt 509
Query: 301 ctgcaaaacattttatttatttgctaagattttatcttctcttccttctccttccagttt 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ctacaaaacattttatttatttgctaagattttatcttctcttccttctccttccagttt 449
Query: 361 cttcctataaagctaagacattataatggtacctaaagtatttccctactgaaggagt-- 418
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | |
Sbjct: 448 cttcatataaagctaagacattataatgatacctaaagtatttccctactgaag-actcc 390
Query: 419 t--agttctctcaggctgccacttcttcctcatgatgcaccttttttgaaagatacatca 476
| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 389 ttcagttctctcaggctgccacttcttcctcatgatgcacctgttttgaaagatacatca 330
Query: 477 acttctcgtgggctggggtttgccacttactggagacatcaacttaatttccatgcattt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 acttctcgtgggctggggtttgccacttactggagacatcaacttaatttccatgcattt 270
Query: 537 aaaaaataaataatgctgagtatttcttcttttgtaggcttataagtgtgtgcatatttg 596
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 269 aaaaaataaataatgctgagtatttcttcttttgtgggcttataagtgtatgcatatttg 210
Query: 597 tctgttgga 605
|||||||||
Sbjct: 209 tctgttgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1008
Length adjustment: 10
Effective length of query: 595
Effective length of database: 998
Effective search space: 593810
Effective search space used: 593810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
