Query= MSMg01no525_m15.b1 MSMg01no525_m15.b1 CHROMAT_FILE:
MSMg01no525_m15.b1 PHD_FILE: MSMg01no525_m15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:31 2005
(641 letters)
>mm_chr2_82050562_82051603
Length = 1042
Score = 1164 bits (602), Expect = 0.0
Identities = 626/634 (98%), Gaps = 1/634 (0%)
Strand = Plus / Minus
Query: 9 gaattcagctggtatcacagatcatttctattgtcactttaaagagacattcttgctttc 68
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 gaattcagctggtataaaagatcatttctattgtcactttaaagagacattcttgctttc 783
Query: 69 gtttttcagtctttcaaaccaaatatatggattcttcttctgttctggaggtagctttca 128
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||
Sbjct: 782 gtttttcagtctttcaaaccaaatatatgaatttttcttctgttctggaggtagctctca 723
Query: 129 gaaaatcatgaaacatagcaaagctactggtgctgtactttggagattaagagacgtgtg 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gaaaatcatgaaacatagcaaagctactggtgctgtactttggagattaagagacgtgtg 663
Query: 189 gttcctgagtcttactgcagcacactggttatattttagtttcttttcccactagcttac 248
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gttcccgagtcttactgcagcacactggttatattttagtttcttttcccactagcttac 603
Query: 249 ttctacaaattgaggctgtagttaaacagatcttacattttattgtgctgtgatagttct 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttctacaaattgaggctgtagttaaacagatcttacattttattgtgctgtgatagttct 543
Query: 309 gcaggtgtacctgg-taaaaaaaaattacagccattttcccacccaagctggattctatc 367
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gcaggtgtacctggttaaaaaaaaattacagccattttcccacccaagctggattctatc 483
Query: 368 atctagtaaaatgttttattctcagagaaatcttctcagagtttcagagaaccaatttag 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 atctagtaaaatgttttattctcagagaaatcttctcagagtttcagagaaccaatttag 423
Query: 428 ctctttaggagtggatggaaggtgactcaccatgaaatattgatattaaagtgtgagctg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ctctttaggagtggatggaaggtgactcaccatgaaatattgatattaaagtgtgagctg 363
Query: 488 aagtgttctcaattgtatactaacagttttcttttaaagtcactctagtactcttgaact 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aagtgttctcaattgtatactaacagttttcttttaaagtcactctagtactcttgaact 303
Query: 548 tccagaggactcatcttttgactgtttgctagtgtagactcctaacgtatcacctaataa 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tccagaggactcatcttttgactgtttgctagtgtagactcctaacgtatcacctaataa 243
Query: 608 caaaagaaatttgcttcatatgattaaacattta 641
|||||||||||||||||| |||||||||||||||
Sbjct: 242 caaaagaaatttgcttcaaatgattaaacattta 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1042
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1032
Effective search space: 651192
Effective search space used: 651192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_m15.g1 MSMg01no525_m15.g1 CHROMAT_FILE:
MSMg01no525_m15.g1 PHD_FILE: MSMg01no525_m15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:31 2005
(622 letters)
>mm_chr2_81896656_81897681
Length = 1026
Score = 1087 bits (562), Expect = 0.0
Identities = 610/628 (97%), Gaps = 8/628 (1%)
Strand = Plus / Plus
Query: 1 aatggcaactatgaggaagtccactcaagaaattaacttcttttcatacttaatccatga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 aatggcaactatgaggaagtccactcaagaaattaacttcttttcatacttaatccgtga 260
Query: 61 cttc-tataacaaaaatggcagctctcctgtagaacgaatacctt---atgaaggtatgg 116
|||| |||| |||||||||||||||||||||||| |||||||||| |||||| |||||
Sbjct: 261 cttcctatagcaaaaatggcagctctcctgtagaccgaataccttgatatgaagatatgg 320
Query: 117 ttgtgtatgtatatatgcacttatttgtaccccactgtatccaaaacatttgagagtctt 176
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 321 ttgtgtatgtatatatgcacttatttgtaccccactgtatccacagcatttgagagtctt 380
Query: 177 gaacctattcatgaaattttccaaattagcaattttaatacattcaaaagcatctgctta 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 gaacctattcatgaaattttccaaattagcaattttaatacattcaaaagcatccgctta 440
Query: 237 tataatgtcttgaaggaaaaaaaa--gagaaaagaatggtaaagtgacttatttgtgtct 294
|||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 tataatgtcttgaaagaaaaaaaaaagagaaaagaatggtaaagtgacttatttgtgtct 500
Query: 295 gttacaaactgcataacttaatatcatggaatgagaaattaatcttttattagtgacaca 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttacaaactgcataacttaatatcatggaatgagaaattaatcttttattagtgacaca 560
Query: 355 aattattaggtaattttagtaggtaaagtttaagatcttgaataaactttttaagcagtc 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aattattaggtaattttagtaggtaaagtttaagatcttgaataaactttttaagcagtc 620
Query: 415 tgtttttgactagtttgcattagaaactacatttttttgaataaagtcatttgttaatag 474
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 621 tgtttttgactagtttgcattagaaactacatttttt-gaataaagtcattt-ttaatag 678
Query: 475 aattttgcaatttatacacagaaattatttcacccacttatacattttaaatgttttaat 534
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 679 aattctgcaatttatacacagaaattatttcacccacttatacattttaaatgtttcaat 738
Query: 535 atataattaaatatgcaatatatatttatgtcatttcaatgtgtagtatgaattttgaca 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 atataattaaatatgcaatatatatttatgtcatttcaatgtgtagtatgaattttgaca 798
Query: 595 ttaggaacttgagatgtcattatttgtt 622
||||||||||||||||||||||||||||
Sbjct: 799 ttaggaacttgagatgtcattatttgtt 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1026
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1016
Effective search space: 621792
Effective search space used: 621792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
