Query= MSMg01no525_n22.b1 MSMg01no525_n22.b1 CHROMAT_FILE:
MSMg01no525_n22.b1 PHD_FILE: MSMg01no525_n22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:37 2005
(539 letters)
>mm_chr2_101411255_101412197
Length = 943
Score = 694 bits (359), Expect = 0.0
Identities = 443/475 (93%), Gaps = 15/475 (3%)
Strand = Plus / Minus
Query: 5 gaattccttcaatccctaagaagggaatgtgactggatagtgaataactttcattcttgt 64
||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 470 gaattcctttgatccctaagaagggaatatgactggatggtgaataactttcattcttgt 411
Query: 65 ttggacaaaggccagactgccaggacatataatagtcatgggcctccaatggttggactc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ttggacaaaggccagactgccaggacatataatagtcatgggcctccaatggttggactc 351
Query: 125 ccttacatgtggtgatcgccagaccccaggaagttcctctctac----tacaaactactt 180
||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||
Sbjct: 350 ccttacatgtgctgttcgccagaccctaggaagttcctctctaccaggtacaaactattt 291
Query: 181 aggcatccattctatcctgctcctgggccctgagcagacatcaataacaactgcagtaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 290 aggcatccattctatcctgctcctgggccctgagcagacatcaataacaactgcaataat 231
Query: 241 catagttaatattaagagctaatactggactgccaatgtagctcag-ttggtagag--gg 297
|| || |||||||||||||||||||||| ||| | ||||||||||| ||| ||||| ||
Sbjct: 230 cacaggtaatattaagagctaatactgggctgtcgatgtagctcagcttg-tagagaagg 172
Query: 298 cttgcccagcatgcgta--aagtcctgggtttgatcccctgcccccaaca-taacataca 354
|||||||||||||| | ||||||||| |||||||||||| |||||||| || ||||||
Sbjct: 171 cttgcccagcatgc--aggaagtcctggatttgatcccctgtccccaacacta-cataca 115
Query: 355 accagtcttggagagtcctgcgactccagcacttgagaggtagagtcaggaagaatgggc 414
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 atcagtcttggagagtcctgcgactccagcacttgagaggtagagtcaggaagaatgggc 55
Query: 415 atttcaagatataaccagcctgtggtacatgggctcatgactcccaagtaaaaaa 469
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 54 atttcaagatataaccagcctgtggtacatgggctcatgactcccaag-aaaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 943
Length adjustment: 10
Effective length of query: 529
Effective length of database: 933
Effective search space: 493557
Effective search space used: 493557
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_n22.g1 MSMg01no525_n22.g1 CHROMAT_FILE:
MSMg01no525_n22.g1 PHD_FILE: MSMg01no525_n22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:37 2005
(557 letters)
>mm_chr12_66226140_66227096
Length = 957
Score = 1069 bits (553), Expect = 0.0
Identities = 556/557 (99%)
Strand = Plus / Plus
Query: 1 cttaaacagtacagccatgggaagaaagaaggctagaaagcttaggagtcagggtttgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttaaacagtacagccatgggaagaaagaaggctagaaagcttaggagtcagggtttgtg 260
Query: 61 aggtgggtaggaagagctgagttactccaggctgaacagcttctttgatgcaggacagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtgggtaggaagagctgagttactccaggctgaacagcttctttgatgcaggacagta 320
Query: 121 agtgtttgtgtaattgggggtataagtgacggtgtacatgacaggaagaggtaaacatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgtttgtgtaattgggggtataagtgacggtgtacatgacaggaagaggtaaacatgg 380
Query: 181 gaaaactggatttacacaggtcactgaaacaggtacctaggctgcacctacaaatgcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaactggatttacacaggtcactgaaacaggtacctaggctgcacctacaaatgcaag 440
Query: 241 attggaagtatagctctaggatttctctggcagtagcttaatcattggagaatctgtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attggaagtatagctctaggatttctctggcagtagcttaatcattggagaatctgtgaa 500
Query: 301 taaccaagtttttagtgttgataagatacttgtttgccctgctcatctcatggtgtaaca 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 taaccaagtttttagtgttgataagatacttgtttgccctgctcatctcacggtgtaaca 560
Query: 361 aggatgaaataagctgtcttattgaaagatgtcatggaaagattgggaaacttaagtaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggatgaaataagctgtcttattgaaagatgtcatggaaagattgggaaacttaagtaaa 620
Query: 421 aggaaatagtggtttgtgagaaacactagtttggaaattggacagcatctccttcctcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggaaatagtggtttgtgagaaacactagtttggaaattggacagcatctccttcctcat 680
Query: 481 gcttccatggtgggttcctaccatgttccttggttgtaccttgcataagccacttcacct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcttccatggtgggttcctaccatgttccttggttgtaccttgcataagccacttcacct 740
Query: 541 ttcagaaatgtgctccg 557
|||||||||||||||||
Sbjct: 741 ttcagaaatgtgctccg 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
