Query= MSMg01no525_o07.b1 MSMg01no525_o07.b1 CHROMAT_FILE:
MSMg01no525_o07.b1 PHD_FILE: MSMg01no525_o07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:39 2005
(494 letters)
>mm_chr2_32768661_32769552
Length = 892
Score = 613 bits (317), Expect = e-180
Identities = 336/343 (97%), Gaps = 2/343 (0%)
Strand = Plus / Minus
Query: 1 ccagaaaccattagatccagctataaaaaaaacaaaaatcttgaccaatcacaagcagac 60
||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 341 ccagaaaccattatatccagctat--aaaaaacaaaaatcttgaccaatcacaagcagac 284
Query: 61 tcgtgctccagtaccctcaaatccacaggcacacttatcactgtcttacttagaacccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tcgtgctccagtaccctcaaatccacaggcacacttatcactgtcttacttagaacccaa 224
Query: 121 gagggaagccagtctccatgcaagttaaccttggttgtcagtgtgacagggtttagaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 223 gagggaagccagtctccatgcaagttaaccttggttgtcagtgtgacagtgtttagaatc 164
Query: 181 actgtggaaacaaacctctgggcatatcagagaggaagtttctagagtaggctagctaag 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 163 actgtggaaacaaacctctggacatatcagagaggaagtttctagagtaggctagctaag 104
Query: 241 gtggaagagtccccgaaatctgggtgtcgccccatgcgttgggcttccagactgaataag 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 103 gtggaagagtccccgaaatctgggtggcgccccatgcgttgggcttccagactgaataag 44
Query: 301 aagggagcagagagcagcgtccattgctctctgttttctgact 343
||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 43 aagggagcagagagcagcgtccattgctctctgctttctgact 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 892
Length adjustment: 10
Effective length of query: 484
Effective length of database: 882
Effective search space: 426888
Effective search space used: 426888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_o07.g1 MSMg01no525_o07.g1 CHROMAT_FILE:
MSMg01no525_o07.g1 PHD_FILE: MSMg01no525_o07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:39 2005
(434 letters)
>mm_chr2_32614829_32615662
Length = 834
Score = 812 bits (420), Expect = 0.0
Identities = 432/438 (98%), Gaps = 4/438 (0%)
Strand = Plus / Plus
Query: 1 ctgtctctaccctcatagaaggagctcaagagctgggttcaggggaacctcactgcctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtctctaccctcatagaaggagctcaagagctgggttcaggggaacctcactgcctgt 260
Query: 61 ggccgatcccttttcctcttcgatgagatggacaagctgcctcctggcctgatggaagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggccgatcccttttcctcttcgatgagatggacaagctgcctcctggcctgatggaagtc 320
Query: 121 ctgcagcccttcctgggcccttcttgggttgtgtatgggaccaactatcgcaaagccatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgcagcccttcctgggcccttcttgggttgtgtatgggaccaactatcgcaaagccatc 380
Query: 181 ttcatctttatcaggtctggcctctattgcaagcaagtgggggtggaggggcacttgtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcatctttatcaggtctggcctctattgcaagcaagtgggggtggaggggcacttgtta 440
Query: 241 gaggtctagctgtccatcgtgggcctgtgctcccagcagggtgctctcccaggagcgcat 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggtctagctgtccagcgtgggcctgtgctcccagcagggtgctctcccaggagcgcat 500
Query: 301 gcatgctctcttgactcctcacttttttttttttttt----ccagacagggtttctctgc 356
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 gcatgctctcttgactcctcactttttttttttttttttttccagacagggtttctctgt 560
Query: 357 atagccctggctgtcctggaactcaactttgtagaccaggctgaaattcgcctgcctctg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atagccctggctgtcctggaactcaactttgtagaccaggctgaaattcgcctgcctctg 620
Query: 417 cctcccgggtgctgggat 434
||||||||||||||||||
Sbjct: 621 cctcccgggtgctgggat 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
