Query= MSMg01no526_b11.b1 MSMg01no526_b11.b1 CHROMAT_FILE:
MSMg01no526_b11.b1 PHD_FILE: MSMg01no526_b11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:54 2005
(623 letters)
>mm_chr2_120739907_120740930
Length = 1024
Score = 1183 bits (612), Expect = 0.0
Identities = 618/620 (99%), Gaps = 1/620 (0%)
Strand = Plus / Plus
Query: 5 gaattc-caaagcagggtggggtagagacatgcctgatacagatgtggcccaggataagg 63
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacaaagcagggtggggtagagacatgcctgatacagatgtggcccaggataagg 264
Query: 64 aggccaacctggcgaggaagctggggaacatccagagggaaagatatgatggacaggtgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggccaacctggcgaggaagctggggaacatccagagggaaagatatgatggacaggtgt 324
Query: 124 agacaggtaagactgggaactctagggcacattcagatttggccctggctgaccagcagt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agacaggtaagactgggaactctagggcacattcagatttggccctggctgaccagcagt 384
Query: 184 gggattctacgtattcagatgtttgtccaagcttttccaagactacttacttgattaatc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gggattctacgtattcagatgtttgtccaagcttttccaagactacttacttgattaatc 444
Query: 244 cttcccaggcttggctctcacttcctggttatccctactcagtgcactttttttgagtct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttcccaggcttggctctcacttcctggttatccctactcagtgcactttttttgagtct 504
Query: 304 tttaaaacatgaatagttcccaaggacagagatgctaaaagcatgagagtgtatcatgga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttaaaacatgaatagttcccaaggacagagatgctaaaagcatgagagtgtatcatgga 564
Query: 364 agaaacttgggccacagataaactactttaatgattcctaagtaccatgtgtttctgact 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agaaacttgggccacagataaactactttaatgattcctaagtaccatgtgtttctgact 624
Query: 424 gacattaatccaaggattgtttttcagattccacaaagaactcaaacactgcaggtgagc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gacattaatccaaggattgtttttcagattccacaaagaactcaaacactgcaggtgagc 684
Query: 484 aggtgagcttaccatctgcagcatcccttctgtccacagattagactccgtgtccactgc 543
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 685 aggtgagcttaccatctgcagcatcccttctgtccacagattagactccatgtccactgc 744
Query: 544 ccgctcaaagatggtcctgaggatgtacatcataacatcacagctgagcaggttgactac 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ccgctcaaagatggtcctgaggatgtacatcataacatcacagctgagcaggttgactac 804
Query: 604 tttgctgaaagcagggcaga 623
||||||||||||||||||||
Sbjct: 805 tttgctgaaagcagggcaga 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1024
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1014
Effective search space: 621582
Effective search space used: 621582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_b11.g1 MSMg01no526_b11.g1 CHROMAT_FILE:
MSMg01no526_b11.g1 PHD_FILE: MSMg01no526_b11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:55 2005
(537 letters)
>mm_chr2_120855524_120856460
Length = 937
Score = 1038 bits (537), Expect = 0.0
Identities = 537/537 (100%)
Strand = Plus / Minus
Query: 1 cagaacccctcctctttcctgccgcgcccctctgtttactctgtttaacctgtgtttaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 cagaacccctcctctttcctgccgcgcccctctgtttactctgtttaacctgtgtttaaa 678
Query: 61 agctgtgttcatttcacttttcccctgagacacttttgtgttgttacaaattggtcatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 agctgtgttcatttcacttttcccctgagacacttttgtgttgttacaaattggtcatct 618
Query: 121 aggtaaaacttaacaggctactgggaaactccctagggcttccagttgagccagtagggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aggtaaaacttaacaggctactgggaaactccctagggcttccagttgagccagtagggc 558
Query: 181 tctcatttgcaaacctcttctggaaatcacaaggctttttaaagagtggcttgctcctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tctcatttgcaaacctcttctggaaatcacaaggctttttaaagagtggcttgctcctag 498
Query: 241 ccccacactgattaacagagggtgagtggtccaggtcatgggtgaacagtgagaagtacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ccccacactgattaacagagggtgagtggtccaggtcatgggtgaacagtgagaagtacc 438
Query: 301 ctcctgagtttgaattgggccctgggttgcaagagagggctgaaaccaaacccaacctgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctcctgagtttgaattgggccctgggttgcaagagagggctgaaaccaaacccaacctgg 378
Query: 361 gctagcagggcagaagccagcagaatggagggcagacccagcaccctcaggccctcaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gctagcagggcagaagccagcagaatggagggcagacccagcaccctcaggccctcaacc 318
Query: 421 tctcttgcttcttgacagatgatgctgtatttctacagaacgaggctgaacgcacagaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tctcttgcttcttgacagatgatgctgtatttctacagaacgaggctgaacgcacagaat 258
Query: 481 atgtgttgaaccagaacggctttatctacctgggcacagctgactgcattcaggaag 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atgtgttgaaccagaacggctttatctacctgggcacagctgactgcattcaggaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
